directory | Package | Now | Update-To | TODO | MAINTAINER | MASTER_SITES (only the first one checked) | ||
---|---|---|---|---|---|---|---|---|
biology/azara | azara (-1) | 2.7 | -> | 0.0 | mchittur@cs.n | http://www.ccpn.ac.uk/download/azara/(404) | ||
biology/bodr | bodr (empty) | 9 | -> | 10 | jihbed.resear | https://download.sourceforge.net/bodr | ||
biology/bwa | bwa | 0.7.9a | -> | 0.7.16 | 0.7.12 | jwbacon@tds.n | https://download.sourceforge.net/bio-bwa | |
biology/cdhit | cdhit | 4.6.4 | -> | 4.6.8 | jwbacon@tds.n | https://github.com/weizhongli/ | ||
biology/coalesce | coalesce (empty) | 1.5.0.2 | -> | 0.0 | brook@nmsu.ed | http://evolution.genetics.washington.edu/lamarc/coalesce/ | ||
biology/fastDNAml | fastDNAml | 1.2.2 | -> | 0.0 | babafou@babaf | http://geta.life.uiuc.edu/~gary/programs/fastDNAml/(DNS) | ||
biology/fluctuate | fluctuate (empty) | 1.4 | -> | 0.0 | brook@nmsu.ed | http://evolution.gs.washington.edu/lamarc/fluctuate/ | ||
biology/gabedit | gabedit | 2.4.8 | -> | 2.50 | asau@inbox.ru | https://download.sourceforge.net/gabedit | ||
biology/genesplicer | genesplicer (550) | 20030403 | -> | 0.0 | hdp@cs.nmsu.e | ftp://ftp.tigr.org/pub/software/GeneSplicer/(550) | ||
biology/glimmer | glimmer (550) | 2.13 | -> | 0.0 | hdp@cs.nmsu.e | ftp://ftp.tigr.org/pub/software/Glimmer/(550) | ||
biology/gnome-chemistry-utils | gnome-chemistry-utils | 0.12.13 | -> | 0.12.13 | 0.14.11 | pkgsrc-users | http://download-mirror.savannah.gnu.org/releases/gchemutils/0.12/ | |
biology/gromacs | gromacs | 4.5.5 | -> | 5.1.4 | 5.1.2 | pkgsrc-users | ftp://ftp.gromacs.org/pub/gromacs/ | |
biology/hmmer | hmmer | 3.0 | -> | 3.1 | hdp@cs.nmsu.e | http://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/distfiles/ | ||
biology/mopac | mopac | 7.0 | -> | 7-man | pkgsrc-users | http://server.ccl.net/cca/software/LINUX/mopac7/ | ||
biology/mummer | mummer | 3.20 | -> | 3.23 | hdp@cs.nmsu.e | https://download.sourceforge.net/mummer | ||
biology/nut | nut | 15.8 | -> | 0.0 | 20.1 | pkgsrc-users | https://download.sourceforge.net/nut(0) | |
biology/openbabel | openbabel | 2.3.2 | -> | 2.4.1 | pkgsrc-users | https://download.sourceforge.net/openbabel | ||
biology/pdbalign | pdbalign (empty) | 20030812 | -> | 0.0 | hdp@cs.nmsu.e | ftp://ftp.ebi.ac.uk/pub/software/unix/pdbalign/ | ||
biology/phylip | phylip | 3.69 | -> | 0.0 | babafou@babaf | ftp://evolution.genetics.washington.edu/pub/phylip/ | ||
biology/plinkseq | plinkseq | 0.08 | -> | 0.0 | jwbacon@tds.n | http://atgu.mgh.harvard.edu/plinkseq/dist/version-0.08/ | ||
biology/primer3 | primer3 | 2.3.6 | -> | 0.0 | pkgsrc-users | https://download.sourceforge.net/primer3(0) | ||
biology/profit | profit | 2.2 | -> | 0.0 | 2.5.3 | hdp@cs.nmsu.e | http://acrmwww.biochem.ucl.ac.uk/software/profit/235216/ | |
biology/puzzle | puzzle | 5.2 | -> | 5.3 | babafou@babaf | http://www.tree-puzzle.de/ | ||
biology/py-mol | py27-mol | 1.5.0.1 | -> | 3 Legacy B... | pkgsrc-users | https://download.sourceforge.net/pymol | ||
biology/rasmol | rasmol (none) | 2.7.3 | -> | 0.0 | 2.7.5.2 | pkgsrc-users | http://www.bernstein-plus-sons.com/software/(none) | |
biology/sewer | sewer | 2.6 | -> | 0.0 | hdp@cs.nmsu.e | ftp://iubio.bio.indiana.edu/molbio/analyze/ | ||
biology/stride | stride (empty) | 20030804 | -> | 0.0 | hdp@cs.nmsu.e | ftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/ |