directoryPackageNowUpdate-ToTODOMAINTAINERMASTER_SITES (only the first one checked)
biology/azara azara 2.7->0.0mchittur@cs.nhttp://www.ccpn.ac.uk/download/azara/
biology/bodr bodr 9->10jihbed.researhttps://download.sourceforge.net/bodr
biology/bwabwa0.7.9a->0.7.160.7.12jwbacon@tds.nhttps://download.sourceforge.net/bio-bwa
biology/cdhitcdhit4.6.4->4.6.8jwbacon@tds.nhttps://github.com/weizhongli/
biology/coalesce coalesce 1.5.0.2->0.0brook@nmsu.edhttp://evolution.genetics.washington.edu/lamarc/coalesce/
biology/fastDNAmlfastDNAml1.2.2->0.0babafou@babafhttp://geta.life.uiuc.edu/~gary/programs/fastDNAml/
biology/fluctuate fluctuate 1.4->0.0brook@nmsu.edhttp://evolution.gs.washington.edu/lamarc/fluctuate/
biology/gabeditgabedit2.4.8->2.50asau@inbox.ruhttps://download.sourceforge.net/gabedit
biology/genesplicergenesplicer20030403->0.0hdp@cs.nmsu.eftp://ftp.tigr.org/pub/software/GeneSplicer/
biology/glimmerglimmer2.13->0.0hdp@cs.nmsu.eftp://ftp.tigr.org/pub/software/Glimmer/
biology/gnome-chemistry-utilsgnome-chemistry-utils0.12.13->0.12.130.14.11pkgsrc-usershttp://download-mirror.savannah.gnu.org/releases/gchemutils/0.12/
biology/gromacsgromacs4.5.5->5.1.45.1.2pkgsrc-usersftp://ftp.gromacs.org/pub/gromacs/
biology/hmmerhmmer3.0->3.1hdp@cs.nmsu.ehttp://ftp-stud.fht-esslingen.de/pub/Mirrors/gentoo/distfiles/
biology/mopacmopac7.0->7-manpkgsrc-usershttp://server.ccl.net/cca/software/LINUX/mopac7/
biology/mummermummer3.20->3.23hdp@cs.nmsu.ehttps://download.sourceforge.net/mummer
biology/nutnut15.8->0.020.1pkgsrc-usershttps://download.sourceforge.net/nut
biology/openbabelopenbabel2.3.2->2.4.1pkgsrc-usershttps://download.sourceforge.net/openbabel
biology/pdbalign pdbalign 20030812->0.0hdp@cs.nmsu.eftp://ftp.ebi.ac.uk/pub/software/unix/pdbalign/
biology/phylipphylip3.69->0.0babafou@babafftp://evolution.genetics.washington.edu/pub/phylip/
biology/plinkseqplinkseq0.08->0.0jwbacon@tds.nhttp://atgu.mgh.harvard.edu/plinkseq/dist/version-0.08/
biology/primer3primer32.3.6->0.0pkgsrc-usershttps://download.sourceforge.net/primer3
biology/profitprofit2.2->0.02.5.3hdp@cs.nmsu.ehttp://acrmwww.biochem.ucl.ac.uk/software/profit/235216/
biology/puzzlepuzzle5.2->5.3babafou@babafhttp://www.tree-puzzle.de/
biology/py-molpy27-mol1.5.0.1->3 Legacy B...pkgsrc-usershttps://download.sourceforge.net/pymol
biology/rasmolrasmol2.7.3->0.02.7.5.2pkgsrc-usershttp://www.bernstein-plus-sons.com/software/
biology/sewersewer2.6->0.0hdp@cs.nmsu.eftp://iubio.bio.indiana.edu/molbio/analyze/
biology/stride stride 20030804->0.0hdp@cs.nmsu.eftp://ftp.ebi.ac.uk/pub/software/unix/stride/src/