=> Bootstrap dependency digest>=20010302: found digest-20190127 ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. => Checksum SHA1 OK for kalzium-19.08.3.tar.xz => Checksum RMD160 OK for kalzium-19.08.3.tar.xz => Checksum SHA512 OK for kalzium-19.08.3.tar.xz ===> Installing dependencies for kalzium-19.08.3nb1 ========================================================================== The following variables will affect the build process of this package, kalzium-19.08.3nb1. Their current value is shown below: * JPEG_DEFAULT = jpeg * PYTHON_VERSION_DEFAULT = 37 * SSLBASE = /usr * SSLCERTS = /etc/openssl/certs * SSLDIR = /etc/openssl * SSLKEYS = /etc/openssl/private Based on these variables, the following variables have been set: * JPEGBASE (defined, but empty) * JPEG_TYPE = jpeg * PYPACKAGE = python37 * TERMCAP_TYPE = termcap You may want to abort the process now with CTRL-C and change their value before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Tool dependency glib2-tools-[0-9]*: found glib2-tools-2.62.4 => Tool dependency cmake>=2.8.1nb1: found cmake-3.16.3 => Tool dependency pkgconf-[0-9]*: found pkgconf-1.6.0 => Build dependency extra-cmake-modules>=5.19.0: found extra-cmake-modules-5.66.0 => Build dependency kdoctools>=5.19.0: found kdoctools-5.66.0 => Build dependency x11-links>=1.31: found x11-links-1.31 => Build dependency eigen3>=3.1.2: found eigen3-3.3.7 => Build dependency cwrappers>=20150314: found cwrappers-20180325 => Full dependency gnupg2>=2.2.0: found gnupg2-2.2.19nb1 => Full dependency hicolor-icon-theme>=0.9nb1: found hicolor-icon-theme-0.17 => Full dependency kplotting>=5.64.0nb1: found kplotting-5.66.0 => Full dependency qt5-qtbase>=5.14.0: found qt5-qtbase-5.14.1 => Full dependency ocaml>=4.09.0: found ocaml-4.09.0 => Full dependency python37>=3.7.0: found python37-3.7.6nb1 => Full dependency kunitconversion>=5.64.0nb1: found kunitconversion-5.66.0 => Full dependency desktop-file-utils>=0.10nb1: found desktop-file-utils-0.24 => Full dependency khtml>=5.64.0nb1: found khtml-5.66.0 => Full dependency kxmlgui>=5.64.0nb1: found kxmlgui-5.66.0 => Full dependency kwidgetsaddons>=5.64.0nb1: found kwidgetsaddons-5.66.0 ===> Overriding tools for kalzium-19.08.3nb1 ===> Extracting for kalzium-19.08.3nb1 ===> Patching for kalzium-19.08.3nb1 ===> Creating toolchain wrappers for kalzium-19.08.3nb1 ===> Configuring for kalzium-19.08.3nb1 /bin/mkdir -p /tmp/misc/kalzium/work/kalzium-19.08.3/_KDE_build => Install via examples dir. => Generating pkg-config file for builtin expat package. => Fixing CMAKE_MODULE_PATH in CMakeLists.txt -- The C compiler identification is GNU 7.4.0 -- The CXX compiler identification is GNU 7.4.0 -- Check for working C compiler: /tmp/misc/kalzium/work/.cwrapper/bin/gcc -- Check for working C compiler: /tmp/misc/kalzium/work/.cwrapper/bin/gcc -- works -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Detecting C compile features -- Detecting C compile features - done -- Check for working CXX compiler: /tmp/misc/kalzium/work/.cwrapper/bin/c++ -- Check for working CXX compiler: /tmp/misc/kalzium/work/.cwrapper/bin/c++ -- works -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Detecting CXX compile features -- Detecting CXX compile features - done -- Looking for __GLIBC__ -- Looking for __GLIBC__ - not found -- Performing Test _OFFT_IS_64BIT -- Performing Test _OFFT_IS_64BIT - Success -- Performing Test HAVE_DATE_TIME -- Performing Test HAVE_DATE_TIME - Success -- Could not set up the appstream test. appstreamcli is missing. -- Found Gettext: /tmp/misc/kalzium/work/.tools/bin/msgmerge (found version "0.16.1") -- Found PythonInterp: /usr/pkg/bin/python3.7 (found version "3.7.6") -- Found PkgConfig: /tmp/misc/kalzium/work/.tools/bin/pkg-config (found version "1.6.0") -- Checking for module 'openbabel-2.0>=2.2.0' -- Package 'openbabel-2.0', required by 'virtual:world', not found CMake Warning at CMakeLists.txt:30 (find_package): By not providing "FindAvogadroLibs.cmake" in CMAKE_MODULE_PATH this project has asked CMake to find a package configuration file provided by "AvogadroLibs", but CMake did not find one. Could not find a package configuration file provided by "AvogadroLibs" with any of the following names: AvogadroLibsConfig.cmake avogadrolibs-config.cmake Add the installation prefix of "AvogadroLibs" to CMAKE_PREFIX_PATH or set "AvogadroLibs_DIR" to a directory containing one of the above files. If "AvogadroLibs" provides a separate development package or SDK, be sure it has been installed. -- Found Eigen3: /usr/pkg/include/eigen3 (Required is at least version "2.91.0") -- Found OCaml: /tmp/misc/kalzium/work/.buildlink/bin/ocamlc -- Could NOT find Libfacile (missing: LIBFACILE_INCLUDE_DIR LIBFACILE_LIBRARIES) -- Checking for module 'chemical-mime-data' -- Package 'chemical-mime-data', required by 'virtual:world', not found -- Looking for include file ieeefp.h -- Looking for include file ieeefp.h - found -- Found KF5Archive: /usr/pkg/lib/cmake/KF5Archive/KF5ArchiveConfig.cmake (found version "5.66.0") -- Found KF5Config: /usr/pkg/lib/cmake/KF5Config/KF5ConfigConfig.cmake (found version "5.66.0") -- Found KF5CoreAddons: /usr/pkg/lib/cmake/KF5CoreAddons/KF5CoreAddonsConfig.cmake (found version "5.66.0") -- Found KF5DocTools: /usr/pkg/lib/cmake/KF5DocTools/KF5DocToolsConfig.cmake (found version "5.66.0") -- Found KF5I18n: /usr/pkg/lib/cmake/KF5I18n/KF5I18nConfig.cmake (found version "5.66.0") -- Found KF5KHtml: /usr/pkg/lib/cmake/KF5KHtml/KF5KHtmlConfig.cmake (found version "5.66.0") -- Found KF5Parts: /usr/pkg/lib/cmake/KF5Parts/KF5PartsConfig.cmake (found version "5.66.0") -- Found KF5Plotting: /usr/pkg/lib/cmake/KF5Plotting/KF5PlottingConfig.cmake (found version "5.66.0") -- Found KF5Solid: /usr/pkg/lib/cmake/KF5Solid/KF5SolidConfig.cmake (found version "5.66.0") -- Found KF5UnitConversion: /usr/pkg/lib/cmake/KF5UnitConversion/KF5UnitConversionConfig.cmake (found version "5.66.0") -- Found KF5WidgetsAddons: /usr/pkg/lib/cmake/KF5WidgetsAddons/KF5WidgetsAddonsConfig.cmake (found version "5.66.0") -- Found KF5: success (found suitable version "5.66.0", minimum required is "5.42.0") found components: Archive Config CoreAddons DocTools I18n KHtml Parts Plotting Solid UnitConversion WidgetsAddons -- Kalzium molecular editor disabled -- The following OPTIONAL packages have been found: * Eigen3 * OCaml * KF5JS (required version >= 5.66.0) * KF5Service (required version >= 5.66.0) * KF5Bookmarks (required version >= 5.66.0) * KF5Completion (required version >= 5.66.0) * KF5ItemViews (required version >= 5.66.0) * KF5JobWidgets (required version >= 5.66.0) * KF5Sonnet (required version >= 5.66.0) * KF5TextWidgets (required version >= 5.66.0) * KF5Auth (required version >= 5.66.0) * KF5Codecs (required version >= 5.66.0) * KF5ConfigWidgets (required version >= 5.66.0) * KF5XmlGui (required version >= 5.66.0) -- The following REQUIRED packages have been found: * ECM (required version >= 5.42.0) * PythonInterp * PkgConfig * Qt5Script * Qt5Svg * Qt5 (required version >= 5.9.0) * KF5Archive (required version >= 5.42.0) * KF5DocTools (required version >= 5.42.0) * Qt5Gui (required version >= 5.12.0) * KF5KHtml (required version >= 5.42.0) * Gettext * KF5I18n (required version >= 5.66.0) * KF5CoreAddons (required version >= 5.66.0) * Qt5Xml (required version >= 5.12.0) * KF5Config (required version >= 5.66.0) * KF5Parts (required version >= 5.42.0) * KF5Plotting (required version >= 5.42.0) * KF5Solid (required version >= 5.42.0) * Qt5Core (required version >= 5.12.0) * KF5UnitConversion (required version >= 5.42.0) * Qt5Widgets (required version >= 5.12.0) * KF5WidgetsAddons (required version >= 5.42.0) * KF5 (required version >= 5.42.0) -- The following OPTIONAL packages have not been found: * OpenBabel2 * AvogadroLibs * Libfacile -- Configuring done -- Generating done CMake Warning: Manually-specified variables were not used by the project: KDE_INSTALL_AUTOSTARTEXDIR PYTHON_INCLUDE_DIR PYTHON_INCLUDE_PATH -- Build files have been written to: /tmp/misc/kalzium/work/kalzium-19.08.3/_KDE_build => Rewrite cmake Dependencies files