=> Bootstrap dependency digest>=20010302: found digest-20190127 ===> Skipping vulnerability checks. WARNING: No /var/db/pkg/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /var/db/pkg fetch-pkg-vulnerabilities'. ===> Installing for R-fs-1.3.1 => Generating pre-install file lists => Creating installation directories /usr/bin/env R_LIBS= DESTDIR=/tmp/devel/R-fs/work/.destdir USETOOLS=no CC=gcc CFLAGS=-O2\ -D_FORTIFY_SOURCE=2\ -I/usr/pkg/include\ -I/usr/include CPPFLAGS=-I/usr/pkg/include\ -I/usr/include CXX=c++ CXXFLAGS=-O2\ -D_FORTIFY_SOURCE=2\ -I/usr/pkg/include\ -I/usr/include COMPILER_RPATH_FLAG=-Wl,-R F77=gfortran FC=gfortran FFLAGS=-O LANG=C LC_ALL=C LC_COLLATE=C LC_CTYPE=C LC_MESSAGES=C LC_MONETARY=C LC_NUMERIC=C LC_TIME=C LDFLAGS=-L/usr/pkg/lib\ -Wl,-R/usr/pkg/lib\ -L/usr/lib\ -Wl,-R/usr/lib LINKER_RPATH_FLAG=-R PATH=/tmp/devel/R-fs/work/.cwrapper/bin:/tmp/devel/R-fs/work/.buildlink/bin:/tmp/devel/R-fs/work/.gcc/bin:/tmp/devel/R-fs/work/.tools/bin:/usr/pkg/bin:/usr/bin:/bin:/usr/pkg/bin:/usr/local/bin:/usr/pkg/bin:/usr/X11R7/bin PREFIX=/usr/pkg MAKELEVEL=0 CONFIG_SITE= PKG_SYSCONFDIR=/usr/pkg/etc HOME=/tmp/devel/R-fs/work/.home CWRAPPERS_CONFIG_DIR=/tmp/devel/R-fs/work/.cwrapper/config CPP=cpp LOCALBASE=/usr/pkg X11BASE=/usr/X11R7 PKGMANDIR=man PKGINFODIR=info PKGGNUDIR=gnu/ MAKECONF=/dev/null OBJECT_FMT=ELF USETOOLS=no BSD_INSTALL_PROGRAM=/usr/bin/install\ -c\ -s\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT=/usr/bin/install\ -c\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_LIB=/usr/bin/install\ -c\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_DATA=/usr/bin/install\ -c\ -o\ makoto\ -g\ users\ -m\ 644 BSD_INSTALL_MAN=/usr/bin/install\ -c\ -o\ makoto\ -g\ users\ -m\ 644 BSD_INSTALL=/usr/bin/install BSD_INSTALL_PROGRAM_DIR=/usr/bin/install\ -d\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_SCRIPT_DIR=/usr/bin/install\ -d\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_LIB_DIR=/usr/bin/install\ -d\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_DATA_DIR=/usr/bin/install\ -d\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_MAN_DIR=/usr/bin/install\ -d\ -o\ makoto\ -g\ users\ -m\ 755 BSD_INSTALL_GAME=/usr/bin/install\ -c\ -s\ -o\ makoto\ -g\ users\ -m\ 2555 BSD_INSTALL_GAME_DATA=/usr/bin/install\ -c\ -o\ makoto\ -g\ users\ -m\ 664 BSD_INSTALL_GAME_DIR=/usr/bin/install\ -d\ -o\ makoto\ -g\ users\ -m\ 775 INSTALL_INFO= MAKEINFO=/tmp/devel/R-fs/work/.tools/bin/makeinfo FLEX= BISON= PKG_CONFIG= PKG_CONFIG_LIBDIR=/tmp/devel/R-fs/work/.buildlink/lib/pkgconfig:/tmp/devel/R-fs/work/.buildlink/share/pkgconfig PKG_CONFIG_LOG=/tmp/devel/R-fs/work/.pkg-config.log PKG_CONFIG_PATH= CWRAPPERS_CONFIG_DIR=/tmp/devel/R-fs/work/.cwrapper/config /usr/pkg/bin/R CMD INSTALL -l /tmp/devel/R-fs/work/.destdir/usr/pkg/lib/R/library /tmp/devel/R-fs/work/fs * installing *source* package 'fs' ... ** package 'fs' successfully unpacked and MD5 sums checked ** using staged installation ** libs c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c error.cc -o error.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c dir.cc -o dir.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c fs.cc -o fs.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c path.cc -o path.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c link.cc -o link.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c utils.cc -o utils.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c file.cc -o file.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c id.cc -o id.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c unix/getmode.cc -o unix/getmode.o c++ -std=gnu++11 -I"/usr/pkg/lib/R/include" -DNDEBUG -I./libuv/include -I. -pthread -I"/usr/pkg/lib/R/library/Rcpp/include" -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -c RcppExports.cpp -o RcppExports.o cp -p -f libuv/m4/lt_obsolete.m4 libuv/m4/lt~obsolete.m4 (cd libuv \ && touch aclocal.m4 \ && touch -r aclocal.m4 configure Makefile.in \ && CC="gcc" CFLAGS="-O2 -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/X11R7/include/libdrm -I/usr/include/krb5 -fpic -fvisibility=hidden" AR="ar" RANLIB="ranlib" LDFLAGS="-L/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -Wl,-R/usr/pkg/lib -pthread -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib" ./configure --quiet) make --directory=libuv \ HAVE_DTRACE=0 make[1]: Entering directory '/tmp/devel/R-fs/work/fs/src/libuv' CC src/libuv_la-fs-poll.lo CC src/libuv_la-inet.lo CC src/libuv_la-threadpool.lo CC src/libuv_la-uv-common.lo CC src/libuv_la-version.lo CC src/unix/libuv_la-async.lo CC src/unix/libuv_la-core.lo CC src/unix/libuv_la-dl.lo CC src/unix/libuv_la-fs.lo CC src/unix/libuv_la-getaddrinfo.lo CC src/unix/libuv_la-getnameinfo.lo CC src/unix/libuv_la-loop-watcher.lo CC src/unix/libuv_la-loop.lo CC src/unix/libuv_la-pipe.lo CC src/unix/libuv_la-poll.lo CC src/unix/libuv_la-process.lo CC src/unix/libuv_la-signal.lo CC src/unix/libuv_la-stream.lo CC src/unix/libuv_la-tcp.lo CC src/unix/libuv_la-thread.lo CC src/unix/libuv_la-timer.lo CC src/unix/libuv_la-tty.lo CC src/unix/libuv_la-udp.lo CC src/unix/libuv_la-bsd-ifaddrs.lo CC src/unix/libuv_la-kqueue.lo CC src/unix/libuv_la-netbsd.lo CC src/unix/libuv_la-posix-hrtime.lo CCLD libuv.la make[1]: Leaving directory '/tmp/devel/R-fs/work/fs/src/libuv' c++ -std=gnu++11 -shared -Wl,-R/usr/pkg/lib/R/lib -L/usr/pkg/lib/R/lib -L/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -Wl,-R/usr/pkg/lib -pthread -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -o fs.so error.o dir.o fs.o path.o link.o utils.o file.o id.o unix/getmode.o RcppExports.o ./libuv/.libs/libuv.a -pthread -Wl,-R/usr/pkg/lib/R/lib -L/usr/pkg/lib/R/lib -lR installing to /tmp/devel/R-fs/work/.destdir/usr/pkg/lib/R/library/00LOCK-fs/00new/fs/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for 'fs' in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/tmp/devel/R-fs/work/.destdir/usr/pkg/lib/R/library/00LOCK-fs/00new/fs/libs/fs.so': /tmp/devel/R-fs/work/.destdir/usr/pkg/lib/R/library/00LOCK-fs/00new/fs/libs/fs.so: Undefined PLT symbol "kvm_close" (symnum = 241) Error: loading failed Execution halted ERROR: loading failed * removing '/tmp/devel/R-fs/work/.destdir/usr/pkg/lib/R/library/fs' *** Error code 1 Stop. make[1]: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/devel/R-fs *** Error code 1 Stop. make: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/devel/R-fs