=> Bootstrap dependency digest>=20211023: found digest-20220214 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Building for py315-xgboost-3.4.1 * Building wheel... 2026-10-29 08:06:10,845 - scikit_build_core - WARNING - Unknown keys in top-level of pyproject.toml: variant *** scikit-build-core 1.1.1 using CMake 4.4.4 (wheel) *** Configuring CMake... loading initial cache file build/py3-none-netbsd_9_3_amd64/CMakeInit.txt -- xgboost-python: building libxgboost from sources at /tmp/math/py-xgboost/work/xgboost-3.4.1/cpp_src -- The CXX compiler identification is GNU 8.5.0 -- The C compiler identification is GNU 8.5.0 -- Detecting CXX compiler ABI info -- Detecting CXX compiler ABI info - done -- Check for working CXX compiler: /tmp/math/py-xgboost/work/.cwrapper/bin/c++ - skipped -- Detecting CXX compile features -- Detecting CXX compile features - done -- Detecting C compiler ABI info -- Detecting C compiler ABI info - done -- Check for working C compiler: /tmp/math/py-xgboost/work/.cwrapper/bin/gcc - skipped -- Detecting C compile features -- Detecting C compile features - done -- CMake version 4.4.4 -- Performing Test XGBOOST_MM_PREFETCH_PRESENT -- Performing Test XGBOOST_MM_PREFETCH_PRESENT - Success -- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT -- Performing Test XGBOOST_BUILTIN_PREFETCH_PRESENT - Success -- xgboost VERSION: 3.4.1 -- Performing Test CMAKE_HAVE_LIBC_PTHREAD -- Performing Test CMAKE_HAVE_LIBC_PTHREAD - Failed -- Looking for pthread_create in pthreads -- Looking for pthread_create in pthreads - not found -- Looking for pthread_create in pthread -- Looking for pthread_create in pthread - found -- Found Threads: TRUE -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Found OpenMP: TRUE (found version "4.5") found components: C CXX -- Found OpenMP_C: -fopenmp (found version "4.5") -- Found OpenMP_CXX: -fopenmp (found version "4.5") -- Looking for clock_gettime in rt -- Looking for clock_gettime in rt - found -- Looking for fopen64 -- Looking for fopen64 - not found -- Looking for C++ include cxxabi.h -- Looking for C++ include cxxabi.h - found -- Looking for nanosleep -- Looking for nanosleep - found -- Looking for backtrace -- Looking for backtrace - not found -- Found Backtrace: /usr/lib/libexecinfo.so -- /tmp/math/py-xgboost/work/xgboost-3.4.1/cpp_src/dmlc-core/cmake/build_config.h.in -> include/dmlc/build_config.h -- Performing Test SUPPORT_MSSE2 -- Performing Test SUPPORT_MSSE2 - Success -- Configuring done (8.2s) -- Generating done (0.2s) -- Build files have been written to: /tmp/math/py-xgboost/work/xgboost-3.4.1/build/py3-none-netbsd_9_3_amd64 *** Building project with Unix Makefiles... [ 0%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/config.cc.o [ 1%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/data.cc.o [ 2%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/io.cc.o [ 3%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/recordio.cc.o [ 4%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/io/line_split.cc.o [ 5%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/io/recordio_split.cc.o [ 5%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/io/indexed_recordio_split.cc.o [ 6%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/io/input_split_base.cc.o [ 7%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/io/filesys.cc.o [ 8%] Building CXX object xgboost_cpp_build/dmlc-core/CMakeFiles/dmlc.dir/src/io/local_filesys.cc.o [ 9%] Linking CXX static library libdmlc.a [ 9%] Built target dmlc [ 10%] Building CXX object xgboost_cpp_build/src/CMakeFiles/objxgboost.dir/c_api/c_api.cc.o In file included from /tmp/math/py-xgboost/work/xgboost-3.4.1/cpp_src/src/c_api/c_api.cc:30: /tmp/math/py-xgboost/work/xgboost-3.4.1/cpp_src/src/c_api/../data/proxy_dmatrix.h: In member function 'auto xgboost::data::ExternalDataInfo::CalcBatchPtr(const std::vector&) const': /tmp/math/py-xgboost/work/xgboost-3.4.1/cpp_src/src/c_api/../data/proxy_dmatrix.h:154:10: error: 'inclusive_scan' is not a member of 'std' std::inclusive_scan(buffer_rows.cbegin(), buffer_rows.cend(), std::back_inserter(batch_ptr)); ^~~~~~~~~~~~~~ /tmp/math/py-xgboost/work/xgboost-3.4.1/cpp_src/src/c_api/../data/proxy_dmatrix.h:154:10: note: suggested alternative: 'includes' std::inclusive_scan(buffer_rows.cbegin(), buffer_rows.cend(), std::back_inserter(batch_ptr)); ^~~~~~~~~~~~~~ includes *** Error code 1 Stop. make[2]: stopped in /tmp/math/py-xgboost/work/xgboost-3.4.1/build/py3-none-netbsd_9_3_amd64 *** Error code 1 Stop. make[1]: stopped in /tmp/math/py-xgboost/work/xgboost-3.4.1/build/py3-none-netbsd_9_3_amd64 *** Error code 1 Stop. make: stopped in /tmp/math/py-xgboost/work/xgboost-3.4.1/build/py3-none-netbsd_9_3_amd64 *** CMake build failed TIP pass --env-dir and --sdist-extract-dir to keep the build environment and sources, then see https://build.pypa.io/en/stable/how-to/troubleshooting.html#debug-a-failed-build for help debugging a failed build ERROR Backend subprocess exited when trying to invoke build_wheel *** Error code 1 Stop. make[1]: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/math/py-xgboost *** Error code 1 Stop. make: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/math/py-xgboost