=> Bootstrap dependency digest>=20211023: found digest-20220214
=> Checksum BLAKE2s OK for classias-1.1.0.20160722.tar.gz
=> Checksum SHA512 OK for classias-1.1.0.20160722.tar.gz
===> Installing dependencies for classias-1.1.0.20160722
=> Tool dependency mktools-[0-9]*: found mktools-20250213
=> Tool dependency automake>=1.9: found automake-1.18.1
=> Tool dependency autoconf>=2.58: found autoconf-2.73
=> Tool dependency cwrappers>=20150314: found cwrappers-20220403
=> Tool dependency checkperms>=1.1: found checkperms-1.12
=> Full dependency liblbfgs>=1.10: found liblbfgs-1.10
===> Skipping vulnerability checks.
WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Overriding tools for classias-1.1.0.20160722
===> Extracting for classias-1.1.0.20160722
===> Patching for classias-1.1.0.20160722
=> Applying pkgsrc patches for classias-1.1.0.20160722
=> Verifying /amd/pkgsrc/CHROOT/P/pkgsrc/math/classias/patches/patch-configure.in
=> Applying pkgsrc patch /amd/pkgsrc/CHROOT/P/pkgsrc/math/classias/patches/patch-configure.in
Hmm...  Looks like a unified diff to me...
The text leading up to this was:
--------------------------
|$NetBSD: patch-configure.in,v 1.1 2016/07/22 02:45:44 cheusov Exp $
|
|# support for ld -rpath
|
|--- configure.in.orig	2015-04-19 15:01:12.000000000 +0000
|+++ configure.in
--------------------------
Patching file configure.in using Plan A...
Hunk #1 succeeded at 115.
done
===> Creating toolchain wrappers for classias-1.1.0.20160722
===> Configuring for classias-1.1.0.20160722
set -e; cd /tmp/math/classias/work/classias-1.1.0.20160722; /bin/sh ./autogen.sh
aclocal: warning: autoconf input should be named 'configure.ac', not 'configure.in'
autoheader: warning: autoconf input should be named 'configure.ac', not 'configure.in'
automake: warning: autoconf input should be named 'configure.ac', not 'configure.in'
configure.in:31: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated.  For more info, see:
configure.in:31: https://www.gnu.org/software/automake/manual/automake.html#Modernize-AM_005fINIT_005fAUTOMAKE-invocation
configure.in:22: installing './compile'
configure.in:21: installing './config.guess'
configure.in:21: installing './config.sub'
configure.in:31: installing './install-sh'
configure.in:31: installing './missing'
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
Makefile.am: installing './INSTALL'
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
frontend/tag/Makefile.am:21: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
frontend/tag/Makefile.am:7: warning: source file '../contrib/libexecstream/exec-stream.cpp' is in a subdirectory,
frontend/tag/Makefile.am:7: but option 'subdir-objects' is disabled
automake: warning: possible forward-incompatibility.
automake: At least one source file is in a subdirectory, but the 'subdir-objects'
automake: automake option hasn't been enabled.  For now, the corresponding output
automake: object file(s) will be placed in the top-level directory.  However, this
automake: behavior may change in a future Automake major version, with object
automake: files being placed in the same subdirectory as the corresponding sources.
automake: You are advised to start using 'subdir-objects' option throughout your
automake: project, to avoid future incompatibility.
frontend/tag/Makefile.am: installing './depcomp'
automake: warning: autoconf input should be named 'configure.ac', not 'configure.in'
frontend/train/Makefile.am:24: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
frontend/train/Makefile.am:10: warning: source file '../contrib/libexecstream/exec-stream.cpp' is in a subdirectory,
frontend/train/Makefile.am:10: but option 'subdir-objects' is disabled
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
sample/Makefile.am:21: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
configure.in:164: warning: 'INCLUDES' is the old name for 'AM_CPPFLAGS' (or '*_CPPFLAGS')
configure.in:22: warning: The macro 'AC_AIX' is obsolete.
configure.in:22: You should run autoupdate.
./lib/autoconf/specific.m4:724: AC_AIX is expanded from...
configure.in:22: the top level
configure.in:23: warning: The macro 'AC_GNU_SOURCE' is obsolete.
configure.in:23: You should run autoupdate.
./lib/autoconf/specific.m4:486: AC_GNU_SOURCE is expanded from...
configure.in:23: the top level
configure.in:24: warning: The macro 'AC_ISC_POSIX' is obsolete.
configure.in:24: You should run autoupdate.
./lib/autoconf/specific.m4:734: AC_ISC_POSIX is expanded from...
configure.in:24: the top level
configure.in:25: warning: The macro 'AC_MINIX' is obsolete.
configure.in:25: You should run autoupdate.
./lib/autoconf/specific.m4:729: AC_MINIX is expanded from...
configure.in:25: the top level
configure.in:31: warning: AM_INIT_AUTOMAKE: two- and three-arguments forms are deprecated.
./lib/autoconf/general.m4:2490: AC_DIAGNOSE is expanded from...
aclocal.m4:429: AM_INIT_AUTOMAKE is expanded from...
configure.in:31: the top level
configure.in:43: warning: The macro 'AC_LANG_CPLUSPLUS' is obsolete.
configure.in:43: You should run autoupdate.
./lib/autoconf/c.m4:271: AC_LANG_CPLUSPLUS is expanded from...
configure.in:43: the top level
configure.in:58: warning: The macro 'AC_HEADER_STDC' is obsolete.
configure.in:58: You should run autoupdate.
./lib/autoconf/headers.m4:664: AC_HEADER_STDC is expanded from...
configure.in:58: the top level
configure.in:75: warning: The macro 'AC_HELP_STRING' is obsolete.
configure.in:75: You should run autoupdate.
./lib/autoconf/general.m4:205: AC_HELP_STRING is expanded from...
configure.in:75: the top level
=> Modifying GNU configure scripts to avoid --recheck
=> Replacing config-guess with pkgsrc versions
=> Replacing config-sub with pkgsrc versions
=> Replacing install-sh with pkgsrc version
=> Checking for portability problems in extracted files
checking build system type... x86_64--netbsd
checking host system type... x86_64--netbsd
checking for x86_64--netbsd-gcc... gcc
checking whether the C compiler works... yes
checking for C compiler default output file name... a.out
checking for suffix of executables... 
checking whether we are cross compiling... no
checking for suffix of object files... o
checking whether the compiler supports GNU C... yes
checking whether gcc accepts -g... yes
checking for gcc option to enable C23 features... unsupported
checking for gcc option to enable C11 features... none needed
checking whether gcc understands -c and -o together... yes
checking for stdio.h... yes
checking for stdlib.h... yes
checking for string.h... yes
checking for inttypes.h... yes
checking for stdint.h... yes
checking for strings.h... yes
checking for sys/stat.h... yes
checking for sys/types.h... yes
checking for unistd.h... yes
checking for wchar.h... yes
checking for minix/config.h... no
checking whether it is safe to define __EXTENSIONS__... yes
checking whether _XOPEN_SOURCE should be defined... no
checking for library containing strerror... none required
checking for a BSD-compatible install... /usr/bin/install -c -o pbulk -g wheel
checking whether sleep supports fractional seconds... yes
checking filesystem timestamp resolution... 2
checking whether build environment is sane... yes
checking for a race-free mkdir -p... mkdir -p
checking for gawk... /usr/bin/awk
checking whether make sets $(MAKE)... yes
checking whether make supports the include directive... yes (GNU style)
checking whether make supports nested variables... yes
checking xargs -n works... yes
checking whether UID '2029' is supported by ustar format... yes
checking whether GID '0' is supported by ustar format... yes
checking how to create a ustar tar archive... gnutar
checking dependency style of gcc... gcc3
checking whether to enable maintainer-specific portions of Makefiles... no
checking whether the compiler supports GNU C++... yes
checking whether c++ accepts -g... yes
checking dependency style of c++... gcc3
checking whether ln -s works... yes
checking for grep that handles long lines and -e... (cached) /usr/bin/grep
checking for egrep... (cached) /usr/bin/egrep
checking for stdint.h... (cached) yes
checking for an ANSI C-conforming const... yes
checking size of ... 0
checking for size_t... yes
checking whether struct tm is in sys/time.h or time.h... time.h
checking for uint8_t... yes
checking for uint16_t... yes
checking for uint32_t... yes
checking for rand in -lm... yes
checking for pthread_create in -lpthread... yes
checking for lbfgs.h... yes
checking for lbfgs in -llbfgs... yes
checking for tr1/unordered_map... yes
checking for boost/unordered_map.hpp... no
checking that generated files are newer than configure... done
configure: creating ./config.status
config.status: creating Makefile
config.status: creating genbinary.sh
config.status: creating include/Makefile
config.status: creating include/classias/Makefile
config.status: creating include/classias/train/Makefile
config.status: creating include/classias/classify/Makefile
config.status: creating include/classias/classify/linear/Makefile
config.status: creating sample/Makefile
config.status: creating frontend/Makefile
config.status: creating frontend/train/Makefile
config.status: creating frontend/tag/Makefile
config.status: creating win32/Makefile
config.status: creating config.h
config.status: executing depfiles commands