=> Bootstrap dependency digest>=20211023: found digest-20220214 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Installing for R-RSQLite-2.3.9 => Generating pre-install file lists => Creating installation directories * installing *source* package 'RSQLite' ... ** this is package 'RSQLite' version '2.3.9' file 'src/SqliteResultImpl.h' has the wrong MD5 checksum ** using staged installation ** libs using C compiler: 'gcc (nb4 20200810) 7.5.0' using C++ compiler: 'g++ (nb4 20200810) 7.5.0' gcc -I"/usr/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/usr/pkg/lib/R/library/plogr/include' -I'/usr/pkg/lib/R/library/cpp11/include' -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -fvisibility=hidden -fpic -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -c vendor/sqlite3/sqlite3.c -o vendor/sqlite3/sqlite3.o c++ -std=gnu++17 -I"/usr/pkg/lib/R/include" -DNDEBUG -I. -Ivendor -Ivendor/extensions -Ivendor/sqlite3 -DRSQLITE_USE_BUNDLED_SQLITE -DSQLITE_ENABLE_RTREE -DSQLITE_ENABLE_FTS3 -DSQLITE_ENABLE_FTS3_PARENTHESIS -DSQLITE_ENABLE_FTS5 -DSQLITE_ENABLE_JSON1 -DSQLITE_ENABLE_STAT4 -DSQLITE_SOUNDEX -DSQLITE_USE_URI=1 -DSQLITE_MAX_LENGTH=2147483647 -DHAVE_USLEEP=1 -I'/usr/pkg/lib/R/library/plogr/include' -I'/usr/pkg/lib/R/library/cpp11/include' -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -fvisibility=hidden -fpic -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -c DbColumn.cpp -o DbColumn.o In file included from /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11.hpp:7:0, from RSQLite.h:4, from pch.h:1, from DbColumn.cpp:1: /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11/data_frame.hpp: In static member function 'static SEXPREC* cpp11::data_frame::get_attrib0(SEXP, SEXP)': /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11/data_frame.hpp:30:22: error: 'ATTRIB' was not declared in this scope for (SEXP attr = ATTRIB(x); attr != R_NilValue; attr = CDR(attr)) { ^~~~~~ /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11/data_frame.hpp:30:22: note: suggested alternative: 'ALTREP' for (SEXP attr = ATTRIB(x); attr != R_NilValue; attr = CDR(attr)) { ^~~~~~ ALTREP In file included from /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11.hpp:11:0, from RSQLite.h:4, from pch.h:1, from DbColumn.cpp:1: /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11/function.hpp: In static member function 'static SEXPREC* cpp11::package::get_namespace(const char*)': /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11/function.hpp:71:36: error: 'R_NamespaceRegistry' was not declared in this scope return safe[detail::r_env_get](R_NamespaceRegistry, name_sexp); ^~~~~~~~~~~~~~~~~~~ /tmp/databases/R-RSQLite/work/.buildlink/lib/R/library/cpp11/include/cpp11/function.hpp:71:36: note: suggested alternative: 'R_NamespaceEnvSpec' return safe[detail::r_env_get](R_NamespaceRegistry, name_sexp); ^~~~~~~~~~~~~~~~~~~ R_NamespaceEnvSpec *** Error code 1 Stop. make: stopped in /tmp/databases/R-RSQLite/work/RSQLite/src ERROR: compilation failed for package 'RSQLite' * removing '/tmp/databases/R-RSQLite/work/.destdir/usr/pkg/lib/R/library/RSQLite' *** Error code 1 Stop. make[1]: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/databases/R-RSQLite *** Error code 1 Stop. make: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/databases/R-RSQLite