=> Bootstrap dependency digest>=20211023: found digest-20220214 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Installing for R-proxy-0.4.27 => Generating pre-install file lists => Creating installation directories * installing *source* package 'proxy' ... ** this is package 'proxy' version '0.4-27' ** package 'proxy' successfully unpacked and MD5 sums checked ** using staged installation ** libs using C compiler: 'gcc (nb4 20200810) 7.5.0' gcc -I"/usr/pkg/lib/R/include" -DNDEBUG -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -fpic -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -c apply.c -o apply.o In file included from /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rdefines.h:41:0, from apply.c:2: apply.c: In function 'R_apply_dist_data_frame': apply.c:460:22: warning: implicit declaration of function 'ATTRIB'; did you mean 'ALTREP'? [-Wimplicit-function-declaration] PROTECT( CONS(ATTRIB(VECTOR_ELT(x, k)), ^ /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:357:31: note: in definition of macro 'PROTECT' #define PROTECT(s) Rf_protect(s) ^ apply.c:459:23: note: in expansion of macro 'LCONS' c = eval(PROTECT(LCONS(install("identical"), ^~~~~ apply.c:460:8: note: in expansion of macro 'PROTECT' PROTECT( CONS(ATTRIB(VECTOR_ELT(x, k)), ^~~~~~~ apply.c:460:17: note: in expansion of macro 'CONS' PROTECT( CONS(ATTRIB(VECTOR_ELT(x, k)), ^~~~ /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:309:28: warning: passing argument 1 of 'Rf_cons' makes pointer from integer without a cast [-Wint-conversion] #define CONS(a, b) Rf_cons((a), (b)) /* data lists */ ^ /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:357:31: note: in definition of macro 'PROTECT' #define PROTECT(s) Rf_protect(s) ^ apply.c:459:23: note: in expansion of macro 'LCONS' c = eval(PROTECT(LCONS(install("identical"), ^~~~~ apply.c:460:8: note: in expansion of macro 'PROTECT' PROTECT( CONS(ATTRIB(VECTOR_ELT(x, k)), ^~~~~~~ apply.c:460:17: note: in expansion of macro 'CONS' PROTECT( CONS(ATTRIB(VECTOR_ELT(x, k)), ^~~~ apply.c:461:10: note: in expansion of macro 'CONS' CONS(ATTRIB(VECTOR_ELT(y, k)), ^~~~ /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:481:6: note: expected 'SEXP {aka struct SEXPREC *}' but argument is of type 'int' SEXP Rf_cons(SEXP, SEXP); ^~~~~~~ /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:309:28: warning: passing argument 1 of 'Rf_cons' makes pointer from integer without a cast [-Wint-conversion] #define CONS(a, b) Rf_cons((a), (b)) /* data lists */ ^ /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:357:31: note: in definition of macro 'PROTECT' #define PROTECT(s) Rf_protect(s) ^ apply.c:459:23: note: in expansion of macro 'LCONS' c = eval(PROTECT(LCONS(install("identical"), ^~~~~ apply.c:460:8: note: in expansion of macro 'PROTECT' PROTECT( CONS(ATTRIB(VECTOR_ELT(x, k)), ^~~~~~~ apply.c:460:17: note: in expansion of macro 'CONS' PROTECT( CONS(ATTRIB(VECTOR_ELT(x, k)), ^~~~ /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:481:6: note: expected 'SEXP {aka struct SEXPREC *}' but argument is of type 'int' SEXP Rf_cons(SEXP, SEXP); ^~~~~~~ apply.c:521:2: warning: implicit declaration of function 'SET_ATTRIB'; did you mean 'SET_ATTR'? [-Wimplicit-function-declaration] SET_ATTRIB(s, ATTRIB(t)); // fixme: may be wrong ^~~~~~~~~~ SET_ATTR apply.c:522:2: warning: implicit declaration of function 'SET_OBJECT'; did you mean 'NEW_OBJECT'? [-Wimplicit-function-declaration] SET_OBJECT(s, OBJECT(t)); ^~~~~~~~~~ NEW_OBJECT apply.c:522:16: warning: implicit declaration of function 'OBJECT'; did you mean 'OBJSXP'? [-Wimplicit-function-declaration] SET_OBJECT(s, OBJECT(t)); ^~~~~~ OBJSXP gcc -I"/usr/pkg/lib/R/include" -DNDEBUG -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -fpic -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -c arrayIndex.c -o arrayIndex.o In file included from arrayIndex.c:3:0: arrayIndex.c: In function 'stringSubscript': /tmp/math/R-proxy/work/.buildlink/lib/R/include/Rinternals.h:1007:28: warning: implicit declaration of function 'Rf_NonNullStringMatch'; did you mean 'NonNullStringMatch'? [-Wimplicit-function-declaration] #define NonNullStringMatch Rf_NonNullStringMatch ^ arrayIndex.c:180:11: note: in expansion of macro 'NonNullStringMatch' if (NonNullStringMatch(STRING_ELT(s, i), names_j)) { ^~~~~~~~~~~~~~~~~~ gcc -I"/usr/pkg/lib/R/include" -DNDEBUG -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -fpic -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -c distance.c -o distance.o gcc -I"/usr/pkg/lib/R/include" -DNDEBUG -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -fpic -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -c dll.c -o dll.o gcc -I"/usr/pkg/lib/R/include" -DNDEBUG -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -fpic -O2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -Dz_off_t=long -I/usr/X11R7/include -I/usr/pkg/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/pkg/include/libxml2 -c util.c -o util.o gcc -shared -L/usr/pkg/lib/R/lib -Wl,-R/usr/pkg/lib/R/lib -Wl,-zrelro -L/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -Wl,-R/usr/pkg/lib -pthread -L/usr/X11R7/lib -Wl,-R/usr/X11R7/lib -o proxy.so apply.o arrayIndex.o distance.o dll.o util.o -L/usr/pkg/lib/R/lib installing to /tmp/math/R-proxy/work/.destdir/usr/pkg/lib/R/library/00LOCK-proxy/00new/proxy/libs ** R ** inst ** byte-compile and prepare package for lazy loading ** help *** installing help indices ** building package indices ** installing vignettes ** testing if installed package can be loaded from temporary location Error: package or namespace load failed for 'proxy' in dyn.load(file, DLLpath = DLLpath, ...): unable to load shared object '/tmp/math/R-proxy/work/.destdir/usr/pkg/lib/R/library/00LOCK-proxy/00new/proxy/libs/proxy.so': /tmp/math/R-proxy/work/.destdir/usr/pkg/lib/R/library/00LOCK-proxy/00new/proxy/libs/proxy.so: Undefined PLT symbol "Rf_NonNullStringMatch" (symnum = 29) Error: loading failed Execution halted ERROR: loading failed * removing '/tmp/math/R-proxy/work/.destdir/usr/pkg/lib/R/library/proxy' *** Error code 1 Stop. make[1]: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/math/R-proxy *** Error code 1 Stop. make: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/math/R-proxy