hostname:  cluster026
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir conf20691.dir
<.> /bin/mkdir -p conf20691.dir
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir -p .
<.> /bin/mkdir -p -p .
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir --version
<.> /bin/mkdir -p --version
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir .tst
<.> /bin/mkdir -p .tst
[*] /tmp/biology/plinkseq/work/.tools/bin/echo done
<.> echo  done
[*] cc --version
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC --version -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] cc -v
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -v -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] cc -V
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -V -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] cc -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -pie
[*] cc -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -pie
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -g -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -g -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir conftest.dir
<.> /bin/mkdir -p conftest.dir
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir sub
<.> /bin/mkdir -p sub
[*] cc -MT sub/conftest.o -MD -MP -MF sub/conftest.TPo -c -o sub/conftest.o sub/conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -MT sub/conftest.o -MD -MP -MF sub/conftest.TPo -c -o sub/conftest.o sub/conftest.c -I/tmp/biology/plinkseq/work/.buildlink/include
[*] cc -print-prog-name=ld
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -print-prog-name=ld -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] ld -v
<.> ld -v -pie
[*] ld -v
<.> ld -v -pie
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -E -
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E - -I/tmp/biology/plinkseq/work/.buildlink/include
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib conftest.c conftstm.o
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c conftstm.o -pie
[*] cc -E -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -E -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -E -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -E -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -E -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -E -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -pie
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir .libs
<.> /bin/mkdir -p .libs
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -pie
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -fno-rtti -fno-exceptions conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -fno-rtti -fno-exceptions conftest.c
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -fPIC -DPIC -DPIC conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -fPIC -DPIC -DPIC conftest.c
[*] cc -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -static conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -static conftest.c -pie
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir conftest
<.> /bin/mkdir -p conftest
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir out
<.> /bin/mkdir -p out
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -o out/conftest2.o conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -o out/conftest2.o conftest.c
[*] ld --help
<.> ld --help -pie
[*] ld -v
<.> ld -v -pie
[*] cc -E -
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E - -I/tmp/biology/plinkseq/work/.buildlink/include
[*] cc -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.c
[*] cc -shared conftest.o -v -Wl,-soname -Wl,conftest -o conftest
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -shared conftest.o -v -Wl,-soname -Wl,conftest -o conftest -I/tmp/biology/plinkseq/work/.buildlink/include
[*] cc -print-search-dirs
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -print-search-dirs -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] cc -I/usr/pkg/include -I/usr/include -O2 -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -print-multi-os-directory
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -print-multi-os-directory -pie
[*] cc -E -
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E - -I/tmp/biology/plinkseq/work/.buildlink/include
[*] cc -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib conftest.c -lprotobuf
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.c -lprotobuf -pie
[*] c++ --version
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC --version -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] c++ -v
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -v -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] c++ -V
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -V -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] c++ -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] c++ -c -g -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -g -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir conftest.dir
<.> /bin/mkdir -p conftest.dir
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir sub
<.> /bin/mkdir -p sub
[*] c++ -MT sub/conftest.o -MD -MP -MF sub/conftest.TPo -c -o sub/conftest.o sub/conftest.c
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -MT sub/conftest.o -MD -MP -MF sub/conftest.TPo -c -o sub/conftest.o sub/conftest.c -I/tmp/biology/plinkseq/work/.buildlink/include
[*] c++ --version
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC --version -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] c++ -v
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -v -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] c++ -V
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -V -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] c++ -E -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] c++ -E -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] c++ -E -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] c++ -E -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] c++ -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] c++ -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib conftest.cpp -pie
[*] c++ -print-prog-name=ld
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -print-prog-name=ld -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] ld -v
<.> ld -v -pie
[*] c++ -print-prog-name=ld
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -print-prog-name=ld -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] ld --help
<.> ld --help -pie
[*] c++ -E -
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E - -I/tmp/biology/plinkseq/work/.buildlink/include
[*] c++ -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include conftest.cpp
[*] c++ -shared -O2 -I/usr/pkg/include -I/usr/include -v conftest.o
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -shared -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -v conftest.o
[*] c++ -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -fPIC -DPIC -DPIC conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -fPIC -DPIC -DPIC conftest.cpp
[*] c++ -o conftest -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -Wl,-zrelro -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -static conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -o conftest -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -Wl,-zrelro -L/tmp/biology/plinkseq/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -static conftest.cpp -pie
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir conftest
<.> /bin/mkdir -p conftest
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir out
<.> /bin/mkdir -p out
[*] c++ -c -O2 -I/usr/pkg/include -I/usr/include -I/usr/pkg/include -I/usr/include -o out/conftest2.o conftest.cpp
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -c -O2 -I/tmp/biology/plinkseq/work/.buildlink/include -o out/conftest2.o conftest.cpp
[*] c++ -E -
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -E - -I/tmp/biology/plinkseq/work/.buildlink/include
[*] cc --version
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC --version -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] cc -v
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -v -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] cc -V
<.> /tmp/biology/plinkseq/work/.gcc/bin/gcc -fcommon -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -V -I/tmp/biology/plinkseq/work/.buildlink/include -pie
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir conf19833.dir
<.> /bin/mkdir -p conf19833.dir
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir -p .
<.> /bin/mkdir -p -p .
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir -p lib/./.deps
<.> /bin/mkdir -p -p lib/./.deps
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir -p client/./.deps
<.> /bin/mkdir -p -p client/./.deps
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir -p browser/./.deps
<.> /bin/mkdir -p -p browser/./.deps
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir -p index/./.deps
<.> /bin/mkdir -p -p index/./.deps
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir -p util/./.deps
<.> /bin/mkdir -p -p util/./.deps
[*] libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -I/usr/include -O2 -I/usr/pkg/include -I/usr/include -MT libplinkseq_la-vcfz.lo -MD -MP -MF .deps/libplinkseq_la-vcfz.Tpo -c -o libplinkseq_la-vcfz.lo vcfz.cpp
<.> /usr/pkg/bin/libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-vcfz.lo -MD -MP -MF .deps/libplinkseq_la-vcfz.Tpo -c -o libplinkseq_la-vcfz.lo vcfz.cpp
[*] libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -I/usr/include -O2 -I/usr/pkg/include -I/usr/include -MT libplinkseq_la-eval.lo -MD -MP -MF .deps/libplinkseq_la-eval.Tpo -c -o libplinkseq_la-eval.lo eval.cpp
<.> /usr/pkg/bin/libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-eval.lo -MD -MP -MF .deps/libplinkseq_la-eval.Tpo -c -o libplinkseq_la-eval.lo eval.cpp
[*] libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -I/usr/include -O2 -I/usr/pkg/include -I/usr/include -MT libplinkseq_la-gstore.lo -MD -MP -MF .deps/libplinkseq_la-gstore.Tpo -c -o libplinkseq_la-gstore.lo gstore.cpp
<.> /usr/pkg/bin/libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-gstore.lo -MD -MP -MF .deps/libplinkseq_la-gstore.Tpo -c -o libplinkseq_la-gstore.lo gstore.cpp
[*] libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/usr/pkg/include -I/usr/include -O2 -I/usr/pkg/include -I/usr/include -MT libplinkseq_la-token.lo -MD -MP -MF .deps/libplinkseq_la-token.Tpo -c -o libplinkseq_la-token.lo token.cpp
<.> /usr/pkg/bin/libtool --tag=CXX --mode=compile c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-token.lo -MD -MP -MF .deps/libplinkseq_la-token.Tpo -c -o libplinkseq_la-token.lo token.cpp
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir .libs
<.> /bin/mkdir -p .libs
[*] /tmp/biology/plinkseq/work/.tools/bin/mkdir .libs
<.> /bin/mkdir -p .libs
[*] c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-vcfz.lo -MD -MP -MF .deps/libplinkseq_la-vcfz.Tpo -c vcfz.cpp -fPIC -DPIC -o .libs/libplinkseq_la-vcfz.o
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-vcfz.lo -MD -MP -MF .deps/libplinkseq_la-vcfz.Tpo -c vcfz.cpp -fPIC -DPIC -o .libs/libplinkseq_la-vcfz.o
[*] c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-token.lo -MD -MP -MF .deps/libplinkseq_la-token.Tpo -c token.cpp -fPIC -DPIC -o .libs/libplinkseq_la-token.o
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-token.lo -MD -MP -MF .deps/libplinkseq_la-token.Tpo -c token.cpp -fPIC -DPIC -o .libs/libplinkseq_la-token.o
[*] c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-gstore.lo -MD -MP -MF .deps/libplinkseq_la-gstore.Tpo -c gstore.cpp -fPIC -DPIC -o .libs/libplinkseq_la-gstore.o
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-gstore.lo -MD -MP -MF .deps/libplinkseq_la-gstore.Tpo -c gstore.cpp -fPIC -DPIC -o .libs/libplinkseq_la-gstore.o
[*] c++ -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-eval.lo -MD -MP -MF .deps/libplinkseq_la-eval.Tpo -c eval.cpp -fPIC -DPIC -o .libs/libplinkseq_la-eval.o
<.> /tmp/biology/plinkseq/work/.gcc/bin/g++ -std=c++11 -fstack-protector-strong -D_FORTIFY_SOURCE=2 -Wl,-zrelro -fPIC -DHAVE_CONFIG_H -I. -I.. -I/tmp/biology/plinkseq/work/.buildlink/include -O2 -MT libplinkseq_la-eval.lo -MD -MP -MF .deps/libplinkseq_la-eval.Tpo -c eval.cpp -fPIC -DPIC -o .libs/libplinkseq_la-eval.o