=> Bootstrap dependency digest>=20211023: found digest-20220214 => Checksum BLAKE2s OK for R-4.1.3.tar.gz => Checksum SHA512 OK for R-4.1.3.tar.gz ===> Installing dependencies for R-4.1.3 ========================================================================== The following variables will affect the build process of this package, R-4.1.3. Their current value is shown below: * JPEG_DEFAULT = jpeg * KRB5_DEFAULT = heimdal * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp * SSLBASE = /usr * SSLCERTBUNDLE (not defined) * SSLCERTS = /etc/openssl/certs * SSLDIR = /etc/openssl * SSLKEYS = /etc/openssl/private Based on these variables, the following variables have been set: * BLAS_INCLUDES (not defined) * BLAS_LIBS = -lblas * BLAS_TYPE = netlib * CBLAS_LIBS = -lcblas -lblas * JPEGBASE (defined, but empty) * JPEG_TYPE = jpeg * KRB5BASE (defined, but empty) * KRB5_TYPE = heimdal * LAPACKE_LIBS = -llapacke -llapack -lblas * LAPACK_LIBS = -llapack -lblas * TERMCAP_TYPE = termcap You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Tool dependency glib2-tools-[0-9]*: found glib2-tools-2.70.4 => Tool dependency libtool-base>=2.4.2nb9: found libtool-base-2.4.6nb3 => Tool dependency automake>=1.9: found automake-1.16.5nb1 => Tool dependency autoconf>=2.58: found autoconf-2.71nb1 => Tool dependency gmake>=3.81: found gmake-4.3nb3 => Tool dependency imake-[0-9]*: found imake-1.0.8 => Tool dependency gtexinfo>=5.1: found gtexinfo-6.8 => Tool dependency pkgconf-[0-9]*: found pkgconf-1.8.0 => Tool dependency checkperms>=1.1: found checkperms-1.12 => Build dependency libtool-fortran>=2.4.2nb9: found libtool-fortran-2.4.6nb2 => Build dependency x11-links>=1.34: found x11-links-1.34 => Build dependency cwrappers>=20150314: found cwrappers-20180325 => Full dependency perl>=5.0: found perl-5.34.0nb3 => Full dependency libiconv>=1.9.1nb4: found libiconv-1.14nb3 => Full dependency gettext-lib>=0.18: found gettext-lib-0.21 => Full dependency glib2>=2.70.2: found glib2-2.70.4 => Full dependency pango>=1.48.10: found pango-1.50.5 => Full dependency cairo>=1.16.0nb2: found cairo-1.16.0nb4 => Full dependency png>=1.6.0nb1: found png-1.6.37nb1 => Full dependency pcre2>=10.30: found pcre2-10.39 => Full dependency readline>=6.0: found readline-8.1.2 => Full dependency jpeg>=9: found jpeg-9d => Full dependency tiff>=4.0.3nb5: found tiff-4.3.0 => Full dependency lapack>=3.9.0nb1: found lapack-3.10.0 => Full dependency curl>=7.80.0: found curl-7.82.0 => Full dependency tk>=8.6.10nb1: found tk-8.6.12 => Full dependency gcc7>=7.0: found gcc7-7.5.0nb5 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Overriding tools for R-4.1.3 ===> Extracting for R-4.1.3 ===> Patching for R-4.1.3 => Applying pkgsrc patches for R-4.1.3 => Verifying /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-configure.ac => Applying pkgsrc patch /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-configure.ac Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-configure.ac,v 1.5 2022/03/19 23:13:59 brook Exp $ | |Do not include system paths in R_LD_LIBRARY_PATH. |NetBSD, FreeBSD, DragonFly, Darwin and Solaris fixes | |--- configure.ac.orig 2019-06-08 08:57:35.738653089 +0000 |+++ configure.ac -------------------------- Patching file configure.ac using Plan A... Hunk #1 succeeded at 33. Hunk #2 succeeded at 312 (offset 21 lines). Hunk #3 succeeded at 799 (offset 89 lines). Hunk #4 succeeded at 1350 (offset 73 lines). Hunk #5 succeeded at 1455 (offset 89 lines). Hunk #6 succeeded at 1481 (offset 73 lines). Hunk #7 succeeded at 1591 (offset 89 lines). Hunk #8 succeeded at 1635 (offset 73 lines). Hunk #9 succeeded at 2624 (offset 133 lines). done => Verifying /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-m4_R.m4 => Applying pkgsrc patch /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-m4_R.m4 Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-m4_R.m4,v 1.1 2017/10/06 20:47:37 rumko Exp $ | |Ensure tests for clog & co. fail, not just emit warning | |--- m4/R.m4.orig 2017-01-05 23:15:05.000000000 +0000 |+++ m4/R.m4 -------------------------- Patching file m4/R.m4 using Plan A... Hunk #1 succeeded at 225 (offset -1 lines). Hunk #2 succeeded at 905 (offset -110 lines). Hunk #3 succeeded at 1109 (offset -1 lines). Hunk #4 succeeded at 3741 (offset 96 lines). done => Verifying /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-src_library_stats_src_Makefile.in => Applying pkgsrc patch /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-src_library_stats_src_Makefile.in Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-src_library_stats_src_Makefile.in,v 1.2 2016/07/26 04:53:33 wen Exp $ | |${R_INCLUDE_DIR} is used in the default compiler flags. | |--- src/library/stats/src/Makefile.in.orig 2016-07-26 01:57:49.000000000 +0000 |+++ src/library/stats/src/Makefile.in -------------------------- Patching file src/library/stats/src/Makefile.in using Plan A... Hunk #1 succeeded at 10. done => Verifying /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-src_main_character.c => Applying pkgsrc patch /amd/pkgsrc/CHROOT/P/pkgsrc/math/R/patches/patch-src_main_character.c Hmm... Looks like a unified diff to me... The text leading up to this was: -------------------------- |$NetBSD: patch-src_main_character.c,v 1.5 2021/06/13 13:10:47 wen Exp $ | |--- src/main/character.c.orig 2021-06-13 06:56:55.454092033 +0000 |+++ src/main/character.c -------------------------- Patching file src/main/character.c using Plan A... Hunk #1 succeeded at 1744. Hunk #2 succeeded at 1777. done ===> Creating toolchain wrappers for R-4.1.3 pkg_info: can't find package `_BLNK_PKG_DBDIR.libXft_not_found' pkg_info: can't find package `_BLNK_PKG_DBDIR.fontconfig_not_found' ===> Configuring for R-4.1.3 => Substituting "rpath" in configure.ac autoreconf: export WARNINGS= autoreconf: Entering directory '.' autoreconf: configure.ac: not using Gettext autoreconf: running: aclocal --force configure.ac:1761: warning: macro 'AM_LANGINFO_CODESET' not found in library configure.ac:2303: warning: macro 'AM_NLS' not found in library configure.ac:2307: warning: macro 'AM_GNU_GETTEXT_VERSION' not found in library configure.ac:2308: warning: macro 'AM_GNU_GETTEXT' not found in library autoreconf: configure.ac: tracing configure.ac: warning: AM_GNU_GETTEXT is used, but not AM_GNU_GETTEXT_VERSION or AM_GNU_GETTEXT_REQUIRE_VERSION autoreconf: running: libtoolize --copy --force libtoolize: putting auxiliary files in AC_CONFIG_AUX_DIR, 'tools'. libtoolize: copying file 'tools/ltmain.sh' libtoolize: putting macros in AC_CONFIG_MACRO_DIRS, 'm4'. libtoolize: copying file 'm4/libtool.m4' libtoolize: copying file 'm4/ltoptions.m4' libtoolize: copying file 'm4/ltsugar.m4' libtoolize: copying file 'm4/ltversion.m4' libtoolize: copying file 'm4/lt~obsolete.m4' libtoolize: Consider adding '-I m4' to ACLOCAL_AMFLAGS in Makefile.am. autoreconf: configure.ac: not using Intltool autoreconf: configure.ac: not using Gtkdoc autoreconf: running: aclocal --force configure.ac:1761: warning: macro 'AM_LANGINFO_CODESET' not found in library configure.ac:2303: warning: macro 'AM_NLS' not found in library configure.ac:2307: warning: macro 'AM_GNU_GETTEXT_VERSION' not found in library configure.ac:2308: warning: macro 'AM_GNU_GETTEXT' not found in library autoreconf: running: /usr/pkg/bin/autoconf --force autoreconf: running: /usr/pkg/bin/autoheader --force autoreconf: configure.ac: not using Automake autoreconf: 'tools/config.sub' is updated autoreconf: 'tools/config.guess' is updated autoreconf: Leaving directory '.' => Generating pkg-config files for builtin xz package. => Generating pkg-config file for builtin expat package. => Modifying GNU configure scripts to avoid --recheck => Replacing config-guess with pkgsrc versions => Replacing config-sub with pkgsrc versions => Replacing install-sh with pkgsrc version => Checking for portability problems in extracted files checking build system type... x86_64--netbsd checking host system type... x86_64--netbsd loading site script './config.site' loading build-specific script './config.site' checking for pwd... /bin/pwd checking whether builddir is srcdir... yes checking whether ln -s works... yes checking for ar... ar checking for a BSD-compatible install... /usr/bin/install -c -o makoto -g wheel checking for sed... /usr/bin/sed checking for which... /usr/bin/which checking for less... /usr/bin/less checking for gtar... no checking for gnutar... no checking for tar... /usr/bin/tar checking for tex... no checking for pdftex... no configure: WARNING: you cannot build PDF versions of the R manuals checking for pdflatex... 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exists and is declared... yes checking for working ctanh... no checking whether 'struct tm' includes tm_zone... yes checking whether 'struct tm' includes tm_gmtoff... yes checking for dgemm_ in -lblas... yes checking whether double complex BLAS can be used... yes checking whether the BLAS is complete... (cached) yes checking for dpstrf_... no checking for dpstrf_ in -llapack -lblas... yes checking for iconv.h... yes checking for iconv... in libiconv checking whether iconv accepts "UTF-8", "latin1", "ASCII" and "UCS-*"... yes checking whether iconv accepts "CP1252"... yes checking for iconvlist... yes checking for iconv... yes checking for iconv declaration... extern size_t iconv (iconv_t cd, const char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for wchar.h... (cached) yes checking for wctype.h... yes checking whether mbrtowc exists and is declared... yes checking whether wcrtomb exists and is declared... yes checking whether wcscoll exists and is declared... yes checking whether wcsftime exists and is declared... yes checking whether wcstod exists and is declared... yes checking whether mbstowcs exists and is declared... yes checking whether wcstombs exists and is declared... yes checking whether wctrans exists and is declared... yes checking whether wctype exists and is declared... yes checking whether iswctype exists and is declared... yes checking whether wcwidth exists and is declared... yes checking whether wcswidth exists and is declared... yes checking for wctrans_t... yes checking for mbstate_t... yes checking for ICU... no checking for X... libraries /usr/X11R7/lib, headers /usr/X11R7/include checking whether -R must be followed by a space... no checking for gethostbyname... yes checking for connect... yes checking for remove... yes checking for shmat... yes checking for IceConnectionNumber in -lICE... yes checking for X11/Intrinsic.h... yes checking for XtToolkitInitialize in -lXt... yes using X11 ... yes checking for KeySym... yes checking for X11/Xmu/Atoms.h... yes checking for XmuInternAtom in -lXmu... yes checking whether pkg-config knows about cairo and pango... yes checking whether cairo including pango is >= 1.2 and works... yes checking for /usr/pkg/lib/tclConfig.sh... /usr/pkg/lib/tclConfig.sh checking for /usr/pkg/lib/tkConfig.sh... /usr/pkg/lib/tkConfig.sh checking for tcl.h... yes checking for tk.h... yes checking whether compiling/linking Tcl/Tk code works... yes checking for BSD networking... yes checking for rpc/types.h... yes checking for rpc/xdr.h... yes checking for XDR support... yes checking for inflateInit2_ in -lz... yes checking for zlib.h... yes checking if zlib version >= 1.2.5... (cached) yes checking whether zlib support suffices... yes checking for BZ2_bzlibVersion in -lbz2... yes checking for bzlib.h... yes checking if bzip2 version >= 1.0.6... (cached) yes checking whether bzip2 support suffices... yes checking for lzma_version_number in -llzma... yes checking for lzma.h... yes checking if lzma version >= 5.0.3... yes checking for pcre2.h... yes checking for pcre2_compile_8 in -lpcre2-8... yes checking if PCRE2 has Unicode support... yes checking whether PCRE support suffices... yes checking for curl-config... /usr/pkg/bin/curl-config checking libcurl version ... 7.82.0 checking for curl/curl.h... yes checking if libcurl is version 7 and >= 7.28.0... yes checking if libcurl supports https... yes checking if pkg-config knows about libjpeg... yes checking if jpeglib version >= 6b... yes checking for jpeg_destroy_compress in -ljpeg... yes checking if pkg-config knows about libpng... yes checking if libpng version >= 1.2.7... yes checking for png_create_write_struct in -lpng... yes checking if pkg-config knows about libtiff... yes checking for tiffio.h... yes checking for TIFFOpen in -ltiff... yes checking whether leap seconds are treated according to POSIX... yes checking for inline... inline checking for struct stat.st_atim.tv_nsec... yes checking whether struct stat.st_atim is of type struct timespec... yes checking for setitimer... yes checking for special C compiler options needed for large files... no checking for _FILE_OFFSET_BITS value needed for large files... no checking for _LARGEFILE_SOURCE value needed for large files... no checking whether KERN_USRSTACK sysctl is supported... no checking for lpr... lpr checking for paperconf... false checking for Fortran flag to compile .f90 files... none checking for Fortran flag to compile .f95 files... none checking for gfortran option to support OpenMP... (cached) -fopenmp checking for recommended packages... yes checking whether NLS is requested... yes Configuring src/extra/intl directory checking for a race-free mkdir -p... ./tools/install-sh -c -d checking whether we are using the GNU C Library 2 or newer... no checking for x86_64--netbsd-ranlib... ranlib checking for simple visibility declarations... yes checking for stdint.h... yes checking for getpagesize... yes checking for working mmap... yes checking whether integer division by zero raises SIGFPE... yes checking for inttypes.h... yes checking for unsigned long long int... yes checking for inttypes.h... (cached) yes checking whether the inttypes.h PRIxNN macros are broken... no checking for ld used by gcc... ld checking if the linker (ld) is GNU ld... yes checking for shared library run path origin... done checking whether imported symbols can be declared weak... yes checking for multithread API to use... none checking for argz.h... no checking for inttypes.h... (cached) yes checking for limits.h... (cached) yes checking for unistd.h... (cached) yes checking for sys/param.h... (cached) yes checking for getcwd... yes checking for getegid... yes checking for geteuid... yes checking for getgid... yes checking for getuid... yes checking for mempcpy... (cached) no checking for munmap... yes checking for stpcpy... yes checking for strcasecmp... yes checking for strdup... (cached) yes checking for strtoul... yes checking for tsearch... yes checking for argz_count... no checking for argz_stringify... no checking for argz_next... no checking for __fsetlocking... no checking whether feof_unlocked is declared... no checking whether fgets_unlocked is declared... no checking for iconv... (cached) yes checking for iconv declaration... (cached) extern size_t iconv (iconv_t cd, const char * *inbuf, size_t *inbytesleft, char * *outbuf, size_t *outbytesleft); checking for NL_LOCALE_NAME macro... no checking for bison... no checking for long long int... yes checking for long double... yes checking for wchar_t... yes checking for wint_t... yes checking for intmax_t... yes checking whether printf() supports POSIX/XSI format strings... yes checking whether we are using the GNU C Library 2.1 or newer... no checking for stdint.h... (cached) yes checking for SIZE_MAX... yes checking for stdint.h... (cached) yes checking for CFPreferencesCopyAppValue... no checking for CFLocaleCopyCurrent... no checking for ptrdiff_t... yes checking for stddef.h... yes checking for stdlib.h... (cached) yes checking for string.h... (cached) yes checking for asprintf... yes checking for fwprintf... yes checking for putenv... (cached) yes checking for setenv... yes checking for setlocale... yes checking for snprintf... yes checking for wcslen... yes checking whether _snprintf is declared... no checking whether _snwprintf is declared... no checking whether getc_unlocked is declared... yes checking for nl_langinfo and CODESET... (cached) yes checking for LC_MESSAGES... yes checking for CFPreferencesCopyAppValue... (cached) no checking for CFLocaleCopyCurrent... (cached) no checking whether included gettext is requested... no checking for GNU gettext in libc... no checking for GNU gettext in libintl... (cached) yes checking whether to use NLS... yes checking where the gettext function comes from... external libintl checking how to link with libintl... /usr/pkg/lib/libintl.so -Wl,-rpath -Wl,/usr/pkg/lib Finished configuring src/extra/intl directory checking whether OpenMP SIMD reduction is supported... yes using as R_SHELL for scripts ... /bin/sh configure: creating ./config.status config.status: creating Makeconf config.status: creating Makefile config.status: creating doc/Makefile config.status: creating doc/html/Makefile config.status: creating doc/manual/Makefile config.status: creating etc/Makefile config.status: creating etc/Makeconf config.status: creating etc/Renviron config.status: creating etc/javaconf config.status: creating etc/ldpaths config.status: creating m4/Makefile config.status: creating po/Makefile config.status: creating share/Makefile config.status: creating src/Makefile config.status: creating src/appl/Makefile config.status: creating src/extra/Makefile config.status: creating src/extra/blas/Makefile config.status: creating src/extra/intl/Makefile config.status: creating src/extra/tre/Makefile config.status: creating src/extra/tzone/Makefile config.status: creating src/extra/xdr/Makefile config.status: creating src/include/Makefile config.status: creating src/include/Rmath.h0 config.status: creating src/include/R_ext/Makefile config.status: creating src/library/Recommended/Makefile config.status: creating src/library/Makefile config.status: creating src/library/base/DESCRIPTION config.status: creating src/library/base/Makefile config.status: creating src/library/compiler/DESCRIPTION config.status: creating src/library/compiler/Makefile config.status: creating src/library/datasets/DESCRIPTION config.status: creating src/library/datasets/Makefile config.status: creating src/library/graphics/DESCRIPTION config.status: creating src/library/graphics/Makefile config.status: creating src/library/graphics/src/Makefile config.status: creating src/library/grDevices/DESCRIPTION config.status: creating src/library/grDevices/Makefile config.status: creating src/library/grDevices/src/Makefile config.status: creating src/library/grDevices/src/cairo/Makefile config.status: creating src/library/grid/DESCRIPTION config.status: creating src/library/grid/Makefile config.status: creating src/library/grid/src/Makefile config.status: creating src/library/methods/DESCRIPTION config.status: creating src/library/methods/Makefile config.status: creating src/library/methods/src/Makefile config.status: creating src/library/parallel/DESCRIPTION config.status: creating src/library/parallel/Makefile config.status: creating src/library/parallel/src/Makefile config.status: creating src/library/profile/Makefile config.status: creating src/library/stats/DESCRIPTION config.status: creating src/library/stats/Makefile config.status: creating src/library/stats/src/Makefile config.status: creating src/library/stats4/DESCRIPTION config.status: creating src/library/stats4/Makefile config.status: creating src/library/splines/DESCRIPTION config.status: creating src/library/splines/Makefile config.status: creating src/library/splines/src/Makefile config.status: creating src/library/tcltk/DESCRIPTION config.status: creating src/library/tcltk/Makefile config.status: creating src/library/tcltk/src/Makefile config.status: creating src/library/tools/DESCRIPTION config.status: creating src/library/tools/Makefile config.status: creating src/library/tools/src/Makefile config.status: creating src/library/translations/DESCRIPTION config.status: creating src/library/translations/Makefile config.status: creating src/library/utils/DESCRIPTION config.status: creating src/library/utils/Makefile config.status: creating src/library/utils/src/Makefile config.status: creating src/main/Makefile config.status: creating src/modules/Makefile config.status: creating src/modules/X11/Makefile config.status: creating src/modules/internet/Makefile config.status: creating src/modules/lapack/Makefile config.status: creating src/nmath/Makefile config.status: creating src/nmath/standalone/Makefile config.status: creating src/scripts/Makefile config.status: creating src/scripts/R.sh config.status: creating src/scripts/Rcmd config.status: creating src/scripts/javareconf config.status: creating src/scripts/mkinstalldirs config.status: creating src/scripts/pager config.status: creating src/scripts/rtags config.status: creating src/unix/Makefile config.status: creating tests/Makefile config.status: creating tests/Embedding/Makefile config.status: creating tests/Examples/Makefile config.status: creating tools/Makefile config.status: creating src/include/config.h config.status: executing libtool commands rm: libtoolT: No such file or directory config.status: executing stamp-h commands R is now configured for x86_64--netbsd Source directory: . Installation directory: /usr/pkg C compiler: gcc -O2 -fPIC -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 Fortran fixed-form compiler: gfortran -fno-optimize-sibling-calls -O Default C++ compiler: c++ -std=gnu++14 -O2 -fPIC -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 C++11 compiler: c++ -std=gnu++11 -O2 -fPIC -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 C++14 compiler: c++ -std=gnu++14 -O2 -fPIC -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 C++17 compiler: c++ -std=gnu++17 -O2 -fPIC -D_FORTIFY_SOURCE=2 -pthread -I/usr/pkg/include -I/usr/include -I/usr/pkg/include/glib-2.0 -I/usr/pkg/include/gio-unix-2.0 -I/usr/pkg/lib/glib-2.0/include -I/usr/X11R7/include -I/usr/X11R7/include/freetype2 -I/usr/pkg/include/harfbuzz -I/usr/include/krb5 C++20 compiler: Fortran free-form compiler: gfortran -fno-optimize-sibling-calls -O Obj-C compiler: gcc -g -O2 -fobjc-exceptions Interfaces supported: X11, tcltk External libraries: pcre2, readline, BLAS(generic), LAPACK(generic), curl Additional capabilities: PNG, JPEG, TIFF, NLS, cairo Options enabled: shared R library, R profiling Capabilities skipped: ICU Options not enabled: shared BLAS, memory profiling Recommended packages: yes configure: WARNING: you cannot build PDF versions of the R manuals configure: WARNING: you cannot build PDF versions of vignettes and help pages configure: WARNING: I could not determine a browser configure: WARNING: I could not determine a PDF viewer => Modifying libtool scripts to use pkgsrc libtool => Modifying libtool scripts to use pkgsrc depcomp