=> Bootstrap dependency digest>=20211023: found digest-20211023
WARNING: [license.mk] Every package should define a LICENSE.
===> Skipping vulnerability checks.
WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found.
WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'.
===> Building for fastDNAml-1.2.2
--- fastDNAml.o ---
cc -O -c fastDNAml.c
In file included from fastDNAml.c:207:0:
fastDNAml.h:222:10: warning: conflicting types for built-in function 'malloc' [-Wbuiltin-declaration-mismatch]
    char *malloc();
          ^~~~~~
fastDNAml.c: In function 'freeTopol':
fastDNAml.h:228:28: warning: implicit declaration of function 'free' [-Wimplicit-function-declaration]
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:342:5: note: in expansion of macro 'Free'
     Free(tpl->links);
     ^~~~
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:342:5: note: in expansion of macro 'Free'
     Free(tpl->links);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:342:5: note: in expansion of macro 'Free'
     Free(tpl->links);
     ^~~~
fastDNAml.c: In function 'freeTreeNode':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:1533:23: note: in expansion of macro 'Free'
         if (p->x->lv) Free(p->x->lv);
                       ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:1533:23: note: in expansion of macro 'Free'
         if (p->x->lv) Free(p->x->lv);
                       ^~~~
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:1534:9: note: in expansion of macro 'Free'
         Free(p->x);
         ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:1534:9: note: in expansion of macro 'Free'
         Free(p->x);
         ^~~~
fastDNAml.c: In function 'freeTree':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:1560:5: note: in expansion of macro 'Free'
     Free(tr->nodep[1]);       /* Free the actual nodes */
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:1560:5: note: in expansion of macro 'Free'
     Free(tr->nodep[1]);       /* Free the actual nodes */
     ^~~~
fastDNAml.c: In function 'setupxarray':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:2028:9: note: in expansion of macro 'Free'
         Free(x);
         ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:2028:9: note: in expansion of macro 'Free'
         Free(x);
         ^~~~
fastDNAml.c: In function 'makenewz':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:2604:5: note: in expansion of macro 'Free'
     Free(abi);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:2604:5: note: in expansion of macro 'Free'
     Free(abi);
     ^~~~
fastDNAml.c: In function 'readKeyValue':
fastDNAml.c:2886:15: warning: implicit declaration of function 'strlen' [-Wimplicit-function-declaration]
     string += strlen(key);
               ^~~~~~
fastDNAml.c:2886:15: warning: incompatible implicit declaration of built-in function 'strlen'
fastDNAml.c:2886:15: note: include '<string.h>' or provide a declaration of 'strlen'
In file included from /usr/include/stdio.h:597:0,
                 from fastDNAml.c:205:
fastDNAml.c: In function 'fopen_pid':
fastDNAml.c:3231:47: warning: implicit declaration of function 'getpid'; did you mean 'getxtip'? [-Wimplicit-function-declaration]
     (void) sprintf(name_pid, "%s.%d", filenm, getpid());
                                               ^
In file included from fastDNAml.c:207:0:
fastDNAml.c: In function 'treeOut':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:3683:5: note: in expansion of macro 'Free'
     Free(treestr);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:3683:5: note: in expansion of macro 'Free'
     Free(treestr);
     ^~~~
fastDNAml.c: In function 'cmpBestTrees':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:4535:5: note: in expansion of macro 'Free'
     Free(log_f0);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:4535:5: note: in expansion of macro 'Free'
     Free(log_f0);
     ^~~~
fastDNAml.c: In function 'makeDenovoTree':
fastDNAml.h:228:28: warning: incompatible implicit declaration of built-in function 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:4765:5: note: in expansion of macro 'Free'
     Free(enterorder);
     ^~~~
fastDNAml.h:228:28: note: include '<stdlib.h>' or provide a declaration of 'free'
 #define    Free(x)  (void) free((char *) (x))    /* BSD */
                            ^
fastDNAml.c:4765:5: note: in expansion of macro 'Free'
     Free(enterorder);
     ^~~~
fastDNAml.c: At top level:
fastDNAml.c:4775:3: warning: return type defaults to 'int' [-Wimplicit-int]
   main ()
   ^~~~
--- fastDNAml ---
cc -O -o fastDNAml fastDNAml.o -lm