=> Bootstrap dependency digest>=20010302: found digest-20211005 WARNING: [license.mk] Every package should define a LICENSE. ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Installing for mpqc-2.3.1nb11 => Generating pre-install file lists for dir in lib bin src; \ do \ (cd ${dir} && /usr/pkg/bin/gmake "DODEPEND=no" install) || exit 1; \ done gmake[1]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib' for dir in basis elisp perl; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[2]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib/basis' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/basis /usr/bin/install -c -o pbulk -g wheel -m 0644 /tmp/biology/mpqc/work/mpqc-2.3.1/lib/basis/*.kv /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/basis gmake[2]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib/basis' gmake[2]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib/elisp' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/elisp /usr/bin/install -c -o pbulk -g wheel -m 0644 /tmp/biology/mpqc/work/mpqc-2.3.1/lib/elisp/*.el /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/elisp gmake[2]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib/elisp' gmake[2]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib/perl' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/perl /usr/bin/install -c -o pbulk -g wheel -m 0644 /tmp/biology/mpqc/work/mpqc-2.3.1/lib/perl/*.pm /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/perl gmake[2]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib/perl' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1 /usr/bin/install -c -o pbulk -g wheel -m 0644 atominfo.kv magic /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1 gmake[1]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/lib' gmake[1]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/bin' gmake[1]: Nothing to be done for 'install'. gmake[1]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/bin' gmake[1]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src' for dir in lib bin; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[2]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib' for dir in util math chemistry; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[3]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util' for dir in options ref container class state misc keyval group render; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/options' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/options' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/ref' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/ref' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/container' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/container' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/class' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/class' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/state' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/state' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/misc' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/misc' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/keyval' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/keyval' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/group' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/group' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/render' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util/render' gmake[3]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/util' gmake[3]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math' for dir in scmat optimize isosurf symmetry; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/scmat' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/optimize' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/optimize' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/isosurf' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/isosurf' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/symmetry' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math/symmetry' gmake[3]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/math' gmake[3]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry' for dir in molecule solvent qc; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/molecule' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/molecule' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/solvent' gmake[4]: Nothing to be done for 'install'. gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/solvent' gmake[4]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc' for dir in basis oint3 intv3 wfn scf dft mbpt psi; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/basis' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/basis' gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/oint3' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/oint3' gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/intv3' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/intv3' gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/wfn' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/wfn' gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/scf' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/scf' gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/dft' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/dft' gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/mbpt' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/mbpt' gmake[5]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/psi' gmake[5]: Nothing to be done for 'install'. gmake[5]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc/psi' gmake[4]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry/qc' gmake[3]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib/chemistry' finish /tmp/biology/mpqc/work/.destdir/usr/pkg/lib gmake[2]: finish: No such file or directory gmake[2]: [Makefile:13: install] Error 127 (ignored) gmake[2]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/lib' gmake[2]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin' for dir in mpqc scpr scls molrender; \ do \ (cd ${dir} && /usr/pkg/bin/gmake install) || exit 1; \ done gmake[3]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/mpqc' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/bin /usr/bin/install -c -o pbulk -g wheel -m 0755 mpqc /tmp/biology/mpqc/work/.destdir/usr/pkg/bin /usr/bin/install -c -o pbulk -g wheel -m 0755 mpqcrun /tmp/biology/mpqc/work/.destdir/usr/pkg/bin/mpqcrun /usr/bin/install -c -o pbulk -g wheel -m 0755 ccarun /tmp/biology/mpqc/work/.destdir/usr/pkg/bin/ccarun /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1 /usr/bin/install -c -o pbulk -g wheel -m 0755 /tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/mpqc/mpqcrunproc /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/mpqcrunproc /usr/bin/install -c -o pbulk -g wheel -m 0755 /tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/mpqc/ccarunproc /tmp/biology/mpqc/work/.destdir/usr/pkg/share/mpqc/2.3.1/ccarunproc /bin/rm -f /tmp/biology/mpqc/work/.destdir/usr/pkg/bin/chkmpqcout sed "s+exec perl+exec perl -I/usr/pkg/share/mpqc/2.3.1/perl+" \ < /tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/mpqc/validate/checkout.pl \ > /tmp/biology/mpqc/work/.destdir/usr/pkg/bin/chkmpqcout chmod 555 /tmp/biology/mpqc/work/.destdir/usr/pkg/bin/chkmpqcout gmake[3]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/mpqc' gmake[3]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/scpr' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/bin /usr/bin/install -c -o pbulk -g wheel -m 0755 scpr /tmp/biology/mpqc/work/.destdir/usr/pkg/bin gmake[3]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/scpr' gmake[3]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/scls' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/bin /usr/bin/install -c -o pbulk -g wheel -m 0755 scls /tmp/biology/mpqc/work/.destdir/usr/pkg/bin gmake[3]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/scls' gmake[3]: Entering directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/molrender' /usr/bin/install -c -o pbulk -g wheel -d -m 0755 /tmp/biology/mpqc/work/.destdir/usr/pkg/bin /usr/bin/install -c -o pbulk -g wheel -m 0755 molrender /tmp/biology/mpqc/work/.destdir/usr/pkg/bin cd ../../..; CONFIG_FILES=src/bin/molrender/tkmolrender CONFIG_HEADERS= ./config.status config.status: creating src/bin/molrender/tkmolrender /usr/bin/install -c -o pbulk -g wheel -m 0755 tkmolrender /tmp/biology/mpqc/work/.destdir/usr/pkg/bin /bin/rm -f tkmolrender gmake[3]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin/molrender' gmake[2]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src/bin' gmake[1]: Leaving directory '/tmp/biology/mpqc/work/mpqc-2.3.1/src' => Automatic manual page handling => Generating post-install file lists => Checking file-check results for mpqc-2.3.1nb11 => Checking for non-existent script interpreters in mpqc-2.3.1nb11 => Checking file permissions in mpqc-2.3.1nb11 warning: /tmp/biology/mpqc/work/.destdir/usr/pkg/bin/chkmpqcout: executable bit is set on non-executable file. 0 errors and 1 warnings. => Checking for RELRO in mpqc-2.3.1nb11 ERROR: bin/molrender: missing RELRO ERROR: bin/mpqc: missing RELRO ERROR: bin/scls: missing RELRO ERROR: bin/scpr: missing RELRO *** Error code 1 Stop. make[1]: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/biology/mpqc *** Error code 1 Stop. make: stopped in /amd/pkgsrc/CHROOT/P/pkgsrc/biology/mpqc