[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include CMakeCCompilerId.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include CMakeCCompilerId.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] cc -print-sysroot
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -print-sysroot -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -I/tmp/biology/kallisto/work/.buildlink/include -pie
[*] c++ -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include CMakeCXXCompilerId.cpp
<.> /tmp/biology/kallisto/work/.gcc/bin/g++ -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include CMakeCXXCompilerId.cpp -fPIC -fstack-protector-strong -pie
[*] c++ -print-sysroot
<.> /tmp/biology/kallisto/work/.gcc/bin/g++ -print-sysroot -fPIC -fstack-protector-strong -I/tmp/biology/kallisto/work/.buildlink/include -pie
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -v -o CMakeFiles/cmTC_dfbb6.dir/CMakeCCompilerABI.c.o -c /usr/pkg/share/cmake-3.21/Modules/CMakeCCompilerABI.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_dfbb6.dir/CMakeCCompilerABI.c.o -c /usr/pkg/share/cmake-3.21/Modules/CMakeCCompilerABI.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -Wl,-zrelro -Wl,-znow -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -v CMakeFiles/cmTC_dfbb6.dir/CMakeCCompilerABI.c.o -o cmTC_dfbb6
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -Wl,-zrelro -Wl,-znow -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -v CMakeFiles/cmTC_dfbb6.dir/CMakeCCompilerABI.c.o -o cmTC_dfbb6 -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] c++ -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -v -o CMakeFiles/cmTC_6c168.dir/CMakeCXXCompilerABI.cpp.o -c /usr/pkg/share/cmake-3.21/Modules/CMakeCXXCompilerABI.cpp
<.> /tmp/biology/kallisto/work/.gcc/bin/g++ -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_6c168.dir/CMakeCXXCompilerABI.cpp.o -c /usr/pkg/share/cmake-3.21/Modules/CMakeCXXCompilerABI.cpp -fPIC -fstack-protector-strong
[*] c++ -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -Wl,-zrelro -Wl,-znow -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -v CMakeFiles/cmTC_6c168.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_6c168
<.> /tmp/biology/kallisto/work/.gcc/bin/g++ -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -Wl,-zrelro -Wl,-znow -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -v CMakeFiles/cmTC_6c168.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_6c168 -fPIC -fstack-protector-strong -pie
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -o CMakeFiles/cmTC_9a51a.dir/CheckIncludeFile.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/CheckIncludeFile.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_9a51a.dir/CheckIncludeFile.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/CheckIncludeFile.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -Wl,-zrelro -Wl,-znow -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_9a51a.dir/CheckIncludeFile.c.o -o cmTC_9a51a
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -Wl,-zrelro -Wl,-znow -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_9a51a.dir/CheckIncludeFile.c.o -o cmTC_9a51a -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] cc -DCMAKE_HAVE_LIBC_PTHREAD -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -o CMakeFiles/cmTC_e0862.dir/src.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/src.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -DCMAKE_HAVE_LIBC_PTHREAD -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_e0862.dir/src.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/src.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -Wl,-zrelro -Wl,-znow -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_e0862.dir/src.c.o -o cmTC_e0862
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -Wl,-zrelro -Wl,-znow -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_e0862.dir/src.c.o -o cmTC_e0862 -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_933a2.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.21/Modules/CheckFunctionExists.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_933a2.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.21/Modules/CheckFunctionExists.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -Wl,-zrelro -Wl,-znow -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_933a2.dir/CheckFunctionExists.c.o -o cmTC_933a2 -lpthreads
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -Wl,-zrelro -Wl,-znow -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_933a2.dir/CheckFunctionExists.c.o -o cmTC_933a2 -lpthreads -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_82813.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.21/Modules/CheckFunctionExists.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_82813.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.21/Modules/CheckFunctionExists.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -Wl,-zrelro -Wl,-znow -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_82813.dir/CheckFunctionExists.c.o -o cmTC_82813 -lpthread
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -Wl,-zrelro -Wl,-znow -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_82813.dir/CheckFunctionExists.c.o -o cmTC_82813 -lpthread -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -o CMakeFiles/cmTC_b6eb2.dir/cmake_hdf5_test.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_b6eb2.dir/cmake_hdf5_test.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong
[*] cc -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -Wl,-zrelro -Wl,-znow -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_b6eb2.dir/cmake_hdf5_test.c.o -o cmTC_b6eb2
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -Wl,-zrelro -Wl,-znow -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_b6eb2.dir/cmake_hdf5_test.c.o -o cmTC_b6eb2 -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] cc -I/usr/pkg/include -I/usr/pkg/include -I/usr/include -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -I/tmp/biology/kallisto/work/.buildlink/include -O2 -fPIC -D_FORTIFY_SOURCE=2 -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong
[*] cc -I/usr/pkg/include -I/usr/include -O2 -fPIC -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include cmake_hdf5_test.o -L/usr/pkg/lib /usr/pkg/lib/libhdf5_hl.a /usr/pkg/lib/libhdf5.a -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -lsz -lz -lm -Wl,-rpath -Wl,/usr/pkg/lib
<.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -I/tmp/biology/kallisto/work/.buildlink/include -O2 -fPIC -D_FORTIFY_SOURCE=2 cmake_hdf5_test.o -L/tmp/biology/kallisto/work/.buildlink/lib /usr/pkg/lib/libhdf5_hl.a /usr/pkg/lib/libhdf5.a -Wl,-rpath,/usr/pkg/lib -lsz -lz -lm -Wl,-rpath,/usr/pkg/lib -fPIC -D_FORTIFY_SOURCE=2 -fstack-protector-strong -pie
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/true
<.> true 
[*] /tmp/biology/kallisto/work/.tools/bin/echo 1.4.1
<.> echo  1.4.1
[*] /tmp/biology/kallisto/work/.tools/bin/echo 1.4.1
<.> echo  1.4.1
[*] /tmp/biology/kallisto/work/.tools/bin/mkdir conf2977.dir
<.> /bin/mkdir -p conf2977.dir
[*] /tmp/biology/kallisto/work/.tools/bin/mkdir -p .
<.> /bin/mkdir -p -p .