=> Bootstrap dependency digest>=20010302: found digest-20190127 => Checksum SHA1 OK for rpy2-2.9.1.tar.gz => Checksum RMD160 OK for rpy2-2.9.1.tar.gz => Checksum SHA512 OK for rpy2-2.9.1.tar.gz ===> Installing dependencies for py39-rpy-2.9.1nb2 ========================================================================== The following variables will affect the build process of this package, py39-rpy-2.9.1nb2. Their current value is shown below: * PKGSRC_BLAS_TYPES = netlib openblas openblas_pthread openblas_openmp * PYTHON_VERSION_DEFAULT = 38 * READLINE_DEFAULT = editline Based on these variables, the following variables have been set: * BLAS_LIBS = -lblas * BLAS_TYPE = netlib * LAPACK_LIBS = -llapack -lblas * PYPACKAGE = python39 * READLINE_TYPE = editline * TERMCAP_TYPE = termcap You may want to abort the process now with CTRL-C and change the value of variables in the first group before continuing. Be sure to run `/usr/bin/make clean' after the changes. ========================================================================== => Tool dependency checkperms>=1.1: found checkperms-1.12 => Build dependency cwrappers>=20150314: found cwrappers-20180325 => Full dependency py39-jinja2-[0-9]*: found py39-jinja2-2.11.3 => Full dependency py39-six-[0-9]*: found py39-six-1.16.0 => Full dependency py39-sqlite3-[0-9]*: found py39-sqlite3-3.9.5nb19 => Full dependency py39-setuptools-[0-9]*: found py39-setuptools-56.0.0 => Full dependency pcre2>=10.30: found pcre2-10.37 => Full dependency python39>=3.9.0: found python39-3.9.5nb2 => Full dependency R>=4.0.3nb1: found R-4.0.3nb3 => Full dependency py39-numpy>=1.19.2nb1: found py39-numpy-1.20.3 => Full dependency gcc7>=7.0: found gcc7-7.5.0nb5 ===> Skipping vulnerability checks. WARNING: No /usr/pkg/pkgdb/pkg-vulnerabilities file found. WARNING: To fix run: `/usr/sbin/pkg_admin -K /usr/pkg/pkgdb fetch-pkg-vulnerabilities'. ===> Overriding tools for py39-rpy-2.9.1nb2 ===> Extracting for py39-rpy-2.9.1nb2 ===> Patching for py39-rpy-2.9.1nb2 ===> Creating toolchain wrappers for py39-rpy-2.9.1nb2 ===> Configuring for py39-rpy-2.9.1nb2 => Replacing python interpreter in rpy/tests.py. => Checking for portability problems in extracted files