[*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include CMakeCCompilerId.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include CMakeCCompilerId.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -print-sysroot <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -print-sysroot -D_FORTIFY_SOURCE=2 -fstack-protector -I/tmp/biology/kallisto/work/.buildlink/include [*] c++ -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include CMakeCXXCompilerId.cpp <.> /tmp/biology/kallisto/work/.gcc/bin/g++ -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include CMakeCXXCompilerId.cpp -fstack-protector [*] c++ -print-sysroot <.> /tmp/biology/kallisto/work/.gcc/bin/g++ -print-sysroot -fstack-protector -I/tmp/biology/kallisto/work/.buildlink/include [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -v -o CMakeFiles/cmTC_a139f.dir/CMakeCCompilerABI.c.o -c /usr/pkg/share/cmake-3.20/Modules/CMakeCCompilerABI.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_a139f.dir/CMakeCCompilerABI.c.o -c /usr/pkg/share/cmake-3.20/Modules/CMakeCCompilerABI.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -v CMakeFiles/cmTC_a139f.dir/CMakeCCompilerABI.c.o -o cmTC_a139f <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -v CMakeFiles/cmTC_a139f.dir/CMakeCCompilerABI.c.o -o cmTC_a139f -D_FORTIFY_SOURCE=2 -fstack-protector [*] c++ -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -v -o CMakeFiles/cmTC_5d388.dir/CMakeCXXCompilerABI.cpp.o -c /usr/pkg/share/cmake-3.20/Modules/CMakeCXXCompilerABI.cpp <.> /tmp/biology/kallisto/work/.gcc/bin/g++ -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -v -o CMakeFiles/cmTC_5d388.dir/CMakeCXXCompilerABI.cpp.o -c /usr/pkg/share/cmake-3.20/Modules/CMakeCXXCompilerABI.cpp -fstack-protector [*] c++ -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -v CMakeFiles/cmTC_5d388.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_5d388 <.> /tmp/biology/kallisto/work/.gcc/bin/g++ -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib -v CMakeFiles/cmTC_5d388.dir/CMakeCXXCompilerABI.cpp.o -o cmTC_5d388 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -o CMakeFiles/cmTC_1ef85.dir/CheckIncludeFile.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/CheckIncludeFile.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_1ef85.dir/CheckIncludeFile.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/CheckIncludeFile.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_1ef85.dir/CheckIncludeFile.c.o -o cmTC_1ef85 <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_1ef85.dir/CheckIncludeFile.c.o -o cmTC_1ef85 -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -DCMAKE_HAVE_LIBC_PTHREAD -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -o CMakeFiles/cmTC_e963b.dir/src.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/src.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -DCMAKE_HAVE_LIBC_PTHREAD -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_e963b.dir/src.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/CMakeFiles/CMakeTmp/src.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_e963b.dir/src.c.o -o cmTC_e963b <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_e963b.dir/src.c.o -o cmTC_e963b -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_5da6a.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.20/Modules/CheckFunctionExists.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_5da6a.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.20/Modules/CheckFunctionExists.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_5da6a.dir/CheckFunctionExists.c.o -o cmTC_5da6a -lpthreads <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_5da6a.dir/CheckFunctionExists.c.o -o cmTC_5da6a -lpthreads -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_59ee0.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.20/Modules/CheckFunctionExists.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -o CMakeFiles/cmTC_59ee0.dir/CheckFunctionExists.c.o -c /usr/pkg/share/cmake-3.20/Modules/CheckFunctionExists.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -DCHECK_FUNCTION_EXISTS=pthread_create -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_59ee0.dir/CheckFunctionExists.c.o -o cmTC_59ee0 -lpthread <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -DCHECK_FUNCTION_EXISTS=pthread_create -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_59ee0.dir/CheckFunctionExists.c.o -o cmTC_59ee0 -lpthread -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -o CMakeFiles/cmTC_9a739.dir/cmake_hdf5_test.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -o CMakeFiles/cmTC_9a739.dir/cmake_hdf5_test.c.o -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib CMakeFiles/cmTC_9a739.dir/cmake_hdf5_test.c.o -o cmTC_9a739 <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -O2 -D_FORTIFY_SOURCE=2 -I/tmp/biology/kallisto/work/.buildlink/include -L/tmp/biology/kallisto/work/.buildlink/lib -Wl,-rpath,/usr/pkg/lib CMakeFiles/cmTC_9a739.dir/cmake_hdf5_test.c.o -o cmTC_9a739 -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -I/usr/pkg/include -I/usr/pkg/include -I/usr/include -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -I/tmp/biology/kallisto/work/.buildlink/include -O2 -D_FORTIFY_SOURCE=2 -c /tmp/biology/kallisto/work/kallisto-0.46.1/src/CMakeFiles/hdf5/cmake_hdf5_test.c -D_FORTIFY_SOURCE=2 -fstack-protector [*] cc -I/usr/pkg/include -I/usr/include -O2 -D_FORTIFY_SOURCE=2 -I/usr/pkg/include -I/usr/include cmake_hdf5_test.o -L/usr/pkg/lib /usr/pkg/lib/libhdf5_hl.a /usr/pkg/lib/libhdf5.a -L/usr/pkg/lib -Wl,-R/usr/pkg/lib -L/usr/lib -Wl,-R/usr/lib -lsz -lz -lm -Wl,-rpath -Wl,/usr/pkg/lib <.> /tmp/biology/kallisto/work/.gcc/bin/gcc -fcommon -I/tmp/biology/kallisto/work/.buildlink/include -O2 -D_FORTIFY_SOURCE=2 cmake_hdf5_test.o -L/tmp/biology/kallisto/work/.buildlink/lib /usr/pkg/lib/libhdf5_hl.a /usr/pkg/lib/libhdf5.a -Wl,-rpath,/usr/pkg/lib -lsz -lz -lm -Wl,-rpath,/usr/pkg/lib -D_FORTIFY_SOURCE=2 -fstack-protector [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/true <.> true [*] /tmp/biology/kallisto/work/.tools/bin/echo 1.4.1 <.> echo 1.4.1 [*] /tmp/biology/kallisto/work/.tools/bin/echo 1.4.1 <.> echo 1.4.1 [*] /tmp/biology/kallisto/work/.tools/bin/mkdir conf28200.dir <.> /bin/mkdir -p conf28200.dir [*] /tmp/biology/kallisto/work/.tools/bin/mkdir -p . <.> /bin/mkdir -p -p .